| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0889 |
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| Symbol | |
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| ID | 5661288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1085524 |
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| End bp | 1086228 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235434 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001500751 |
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| Protein GI | 157960717 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCAA AACGTGCGCG CTTAGATAGG TTTATCAGTG CAAAAACCGG CATCAATAAA
AAACATGTCA GATTGCTACT CGCCAAAGGC CAAGTGTTGG TGGATGGTGA AGTGGCCCGA
GATATAGACC AGATCATCGA TGAGTTCTCC CATGTTTGCT TAGACGGCAA GGTCTTACAA
GCCAATGCGC CAAGTTATGT AATGCTCTAT AAACCAGTCG GTGTGGTCAG TGCCACAGTG
GACGACAAGC ATAGGACGGT TATCGACCTA CTTGAGCGGG ACGATAAACA CAGTCTGCAT
ATAGTCGGAC GATTAGATTT GAATACCTCG GGATTACTGT TACTCACCAA CGATGGTCGC
TGGTCGAAGA AGTTGATGTC GCCGGATCAT AAGGTGGGCA AGGTGTATAG GGTGACATTG
AAAAACCCTA TCGATGAATC CTATATTGCT GCATTTGCTG GTGGAATGTA CTTTGCGTTC
GAGGATATCA CCACTCAACC GGCCAAACTT GAAATTGTCG ATGAACATAC GGCCTTGGTG
ACCTTAGTCG AAGGGCGCTA TCACCAAATT AAGCGGATGT TTGGTCGTTT TCGAAACCCG
GTTATAGGCC TACACAGACT ATCGGTTGGT GCTATCGAGC TGGATCCACA ATTGGCTGTG
GGGCAGAGCC GAGACTTATC GATGACAGAG ATCCAAATAG CCTAA
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| Protein sequence | MESKRARLDR FISAKTGINK KHVRLLLAKG QVLVDGEVAR DIDQIIDEFS HVCLDGKVLQ
ANAPSYVMLY KPVGVVSATV DDKHRTVIDL LERDDKHSLH IVGRLDLNTS GLLLLTNDGR
WSKKLMSPDH KVGKVYRVTL KNPIDESYIA AFAGGMYFAF EDITTQPAKL EIVDEHTALV
TLVEGRYHQI KRMFGRFRNP VIGLHRLSVG AIELDPQLAV GQSRDLSMTE IQIA
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