| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0843 |
|---|
| Symbol | |
|---|
| ID | 5661242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 1042307 |
|---|
| End bp | 1043056 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641235388 |
|---|
| Product | oxidoreductase FAD/NAD(P)-binding subunit |
|---|
| Protein accession | YP_001500705 |
|---|
| Protein GI | 157960671 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.262229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGATTG AAGGTCGGGT CATAGAGAAG CGAGACTGGA ACGATAAATT ATTTTCGCTA
AAGATTAGCG TCGATATTGG ACACTTTACT GCAGGACAGT TTATTAAGCT CAGTCAGGTT
GTGGATGATA AACGAATTGG CCGAGCTTAC TCATTAGTTA ACCCTCCGGG AAGTGACTAT
ATAGAAGTGT TAGCTGTGGC TGTTGAAGAG GGACTGTTAT CACCGAACCT GCAAGAACTT
AAGGTCGGTG ACACTATAGA CGTTGCTACC AAAGCGACCG GCTTTATGAC CTTAGACGAA
TTACCTAAAG AAGAGCATAG AGGCAAGCAC CTATGGTTTT TAGCCACTGG CACGGCGGTT
GGGCCATTCA TCTCTATGAT GGATACCAGT GAGCCTTGGC TCTCCTATGA GAAAGTAGTC
TTGGTCTATG GGGTGCGTAA AATTGAAGAC TTAGCTTATC TCGAGCATCT TAAGCAATAT
GAAGCAAGCT ATCCTGAGCA GTTCAAACTG GTGCTTTCTG TGACGCGTGA AGAGCTTAGG
GGCGCTTTGT CTACTCGGAT CCCCGATGCT ATTATCTCCG GAGAGCTAGA AGCTAAAGTA
GGCTTAAAGC TTAGTCCTGA AATTTCGCAA GTGATGATTT GTGGCAATCC GGAGATGATT
ACCCAATCAC AGCAGGTGTT ACAAGATAGA GGATTAGTGA AAAATCTTCG CCGTGCTCCG
GGTCAAGTTA CCGTTGAGAG GTATTGGTAA
|
|---|
| Protein sequence | MWIEGRVIEK RDWNDKLFSL KISVDIGHFT AGQFIKLSQV VDDKRIGRAY SLVNPPGSDY
IEVLAVAVEE GLLSPNLQEL KVGDTIDVAT KATGFMTLDE LPKEEHRGKH LWFLATGTAV
GPFISMMDTS EPWLSYEKVV LVYGVRKIED LAYLEHLKQY EASYPEQFKL VLSVTREELR
GALSTRIPDA IISGELEAKV GLKLSPEISQ VMICGNPEMI TQSQQVLQDR GLVKNLRRAP
GQVTVERYW
|
|---|
| |