| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0801 |
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| Symbol | |
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| ID | 5661200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 992185 |
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| End bp | 993444 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641235346 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001500663 |
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| Protein GI | 157960629 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCAG ATAAGTCTAT GCATGGAAAC GCAGATCAGA TGATAAATAA AATTAAAACA
ATACTTAGGA GAATGTCTCC ACTCTTTATT CTTCTTGTCT TTATTATCGC GGCTCAACTG
CTGATCAGTA CCAAGGAAGC TCCTGAACAG AAAGCCGATA CGGCGCCAGT GCCTATTGTT
GATGTCACAG AAGTGCAGCA ACAAACCGTT TCTTTAAACC TCCCCTCTTA TGGCGTAGTT
AGCCCTAAAT ATAAGACTCA GTTGGTCACC GAAGTTCAAG GGCGTATGCA ATCTATCTCA
AACAACTTTG TTGCCGGTGG CGTGGTAAAG AAAGGCGATG AACTCGCAGT TATTGAACCA
TCTGATTACG AAGCCGACCT GATGCAGGCA CAAGCATCAC TAGCCCAGGC CCAAGCCGCC
CTAGAAGAAG AGATGGCCAA AGGGGAAGTC GCTAAGAATG ACTGGAAAGG CTATGACGGC
GGCATTCCGC CAGAACTAGG TCTACGTCTA CCACAGCTGA AACAAGAACA AGCCAATGTT
AAATTCCAGC AAGCAGCCCT CGCACGCGCA CAACGCAATC TTGAGCGCAC CGTTATTCGT
GCGCCATTCG ATGGCATCAT CAAGGCGCGA AACGTTGACC TTGGCCAATA TGTCACTCTA
GGCACTAATC TAGGTGAGTT ATATGACACC CGAATAGCCG AAGTCAGACT GCCGCTGTCA
AATAACGACC TCGCCTATCT AGAGTCAGTC GACAATCCAG ATACCCATGT TAGCTTAAGT
GCCGATCTCG CTGGTCGAGT GATCACTTGG CAAGGCCAGA TAGTACGTAG CGAAGGCGTC
ATCGATGCCG AAAACCGCAT GGTTTACTTA GTTGCCGAAG TGAAAGATCC TTACCTTAGA
GGTCACCGAG CCGAAGGTCA GCTACCGCTG AAATACGGCA CCTTTGTTAC CGCTGTAATT
AAGGGCCGCA CCGTAGAGGG CATCGTTAAG CTGCCTCGCC ACCTAGTTCG AGATAATCAA
GTCACCATAG TTCATAGCGA TAACAGCATA GAGCTTCGCT CTGTTAACGT AGTTCGTACC
GATCTAGAAA ATGTCTATAT CAAAGATAGC TTAGACAATG GTGAGCGCGT ATCTCTGACC
AATCTGAGCA ATGTTGAAGA TGGTCAAATT GTAAAGATCG TCGGCGAAGA TTCTAGCTCT
AACCAAGACT CTCAAGACGA GAATACAGAA AAGCAACTTG CTAACGCAGG GGTCCAATAA
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| Protein sequence | MQSDKSMHGN ADQMINKIKT ILRRMSPLFI LLVFIIAAQL LISTKEAPEQ KADTAPVPIV
DVTEVQQQTV SLNLPSYGVV SPKYKTQLVT EVQGRMQSIS NNFVAGGVVK KGDELAVIEP
SDYEADLMQA QASLAQAQAA LEEEMAKGEV AKNDWKGYDG GIPPELGLRL PQLKQEQANV
KFQQAALARA QRNLERTVIR APFDGIIKAR NVDLGQYVTL GTNLGELYDT RIAEVRLPLS
NNDLAYLESV DNPDTHVSLS ADLAGRVITW QGQIVRSEGV IDAENRMVYL VAEVKDPYLR
GHRAEGQLPL KYGTFVTAVI KGRTVEGIVK LPRHLVRDNQ VTIVHSDNSI ELRSVNVVRT
DLENVYIKDS LDNGERVSLT NLSNVEDGQI VKIVGEDSSS NQDSQDENTE KQLANAGVQ
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