| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0778 |
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| Symbol | |
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| ID | 5661177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 962918 |
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| End bp | 963865 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235323 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001500640 |
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| Protein GI | 157960606 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.471594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGCCC AGAAAATTAA TCACAATATT TGGCTAAGGG AGCTAGACCA TCCCGCGATT
AACCTTCCTA GATGGCAACA GCAGGTCGAC CTAATCAGCG ATCTTTATCA GGCTAGAGCC
AGCCTGATTA TCCAGTCTAA CGGTAGTAAA GCGCAGATCA CTTGCTGTAA TAAGCAGAGT
AACGCACTGG CAGGTAGCCT TTTTACTGCT GGCGATGTAC TGCAAAGAGA GAGCGTCATT
GATGCTACCT TTGACACCAT TGGCTATGGC CTTGTTCATC TCGATCCCGC GAAAGTTACT
GGCAGCTTTG CCTCATTTAA CAGACTGCTT TCTATCAAGC TCACTTGGCC AGATGGGAGG
TTATTTGGCT GTATGATCAT TTGCGATCCC GCCAAAGAGA AGGTGACTGC CACCTCTGCT
GCAGTCTGTG AAACGGTTAA GGCACTGTTT CAGGGCGAGT TGAAACAGAT GTATCTGATG
GAGCAGTTAC AGCGCCTATC TGTGCAGGAT GAGTTTACCT GTATGCTCAA CCCTTACGGC
TTTAACTTAA TGGCACCAAG GCAGTTAAGC TTGAGCCGTC GCTTCGGCTC CCACGCTGGG
CTAATAGTAT TGCAAGAATG CCCCTCTGCT CACATCCATC AGAAATATAC CGAGTCACAA
CGAATCCGCA TTATTGCGAG GGTCATTTCC GACAGTATGC GTGAGGCGGA TATCTCGGCC
AGAATTCAAG ATGAACAATT TATCATCCTC GCCTTCGTCG ATAGTGAATC CAACCTCGAT
AGCCTAATTG CACGCCTACG TAAACAGATC CACAAAGAGG CGCCGGAGAT TAACCTAATC
GTAGGCAAGA GCTTTTTTAC CCCAGACACT CAACTGTCGT TAATTCCCAT GCAGCAAGAG
GCACTCGCGG ATTTGGAAAG AAATCGGGAT TCTAAAAGAA GATCCTAG
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| Protein sequence | MLAQKINHNI WLRELDHPAI NLPRWQQQVD LISDLYQARA SLIIQSNGSK AQITCCNKQS
NALAGSLFTA GDVLQRESVI DATFDTIGYG LVHLDPAKVT GSFASFNRLL SIKLTWPDGR
LFGCMIICDP AKEKVTATSA AVCETVKALF QGELKQMYLM EQLQRLSVQD EFTCMLNPYG
FNLMAPRQLS LSRRFGSHAG LIVLQECPSA HIHQKYTESQ RIRIIARVIS DSMREADISA
RIQDEQFIIL AFVDSESNLD SLIARLRKQI HKEAPEINLI VGKSFFTPDT QLSLIPMQQE
ALADLERNRD SKRRS
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