Gene Spea_0703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0703 
Symbol 
ID5661102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp863577 
End bp864098 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content48% 
IMG OID641235248 
Product2'-5' RNA ligase 
Protein accessionYP_001500565 
Protein GI157960531 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACTC AAACCAAGCG CGTGTTCTTA GGTTTTTCAC TCAGTCAAAC CCAGACTCAA 
GCGATAACCG CAATCCAGGT GCAGCTGCCT AATAATGTCC GCTTAGTGCC CAGCGCCAAC 
TTGCATATGA CTCTAGCCTT CTTCGGCGCA GCAACACCAG CACAATTATC GGCGCTTATC 
GATAAGGTTA ATCGTCTGCA TAAACCTAAA TTTAGCGTCA CTCTCGATAC GTTAAGCCAC 
TGGGCTAAAC CTAAGATCCT CTGTCTCAGA GGGGATGCCA GTGATAATCG CCTACTCCAG 
CTCGCTCTCG ATACTCAAAG CCTTGCAAAC GAACTTGGCT TACATTGCAG TGAACATCAC 
TATAATCCCC ACATCACCCT ATCGCGCAAG GCAAAGGCTG AAGTGAGCGG TGTCGATTAT 
CAAGCCATAA TTCTACACCC CAAACGGTTA CAGCTGTTTG AATCCCATCC AGGCCCTAAT 
GGGGTCGAAT ATCCAACACT CCACAGTTGG CCATTGTCTT AA
 
Protein sequence
MPTQTKRVFL GFSLSQTQTQ AITAIQVQLP NNVRLVPSAN LHMTLAFFGA ATPAQLSALI 
DKVNRLHKPK FSVTLDTLSH WAKPKILCLR GDASDNRLLQ LALDTQSLAN ELGLHCSEHH 
YNPHITLSRK AKAEVSGVDY QAIILHPKRL QLFESHPGPN GVEYPTLHSW PLS