| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0613 |
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| Symbol | |
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| ID | 5661013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 755440 |
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| End bp | 758571 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641235159 |
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| Product | hypothetical protein |
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| Protein accession | YP_001500476 |
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| Protein GI | 157960442 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGGTATC GCCTAAGTTA CTTACTACTC TTTTATGTGC TCTATAGCAA TGCAGGCTCC
GCGAATGTGC AGCCTGCTTT TATTGATCCA GTATCGACTC AACAGCCTGA ACCTGCATTA
GTTCAAAATG AGTCAAAGCT ACAGTTTTCC ACTTTAAATA ATGCCGATGT CGCGAGTATC
TTAGCGAGAC TGAAACAAAG CTATGGCTTA TCGCAGCAAC AACTGCAATC TCAAGCATTA
ATTTTAGCGT CAACAACCGA CAACAATATA GTGCAGGATG AGTTACCAGG TGAAACTCTC
GGTATTCCTG AAGGTGAGGA GTTACTGTTA TCCCTCTATG TCGACAGTTA TTATTTGTCT
GATGTATTTG CTATAAAAAG CAAACGAAAT GCTCAATTTA GCTTAATGGG TTTATTCGAA
TTAATTGATT TCCCTATTGA AGTTGATATC GGTAATAGCA TAGTTAAAGG CTGGTATTTA
GATGAGGAAC GTCAATTTTT GATGCAGTTA CCCGAGACAG GAGACGAAGT TGTCAGCGTG
TCGGTTAACC AGCAAACTTT TCAATTAACA GCTGCTGATT ACAGCTTAAT GGCTGATGAT
ATTTATGTTG CAGGCGATGT GATTGAAGAT TGGTTTGATA TCACCTTTGA CTACAGTTTT
GCAGATTTAA AGGTGGATAT TAGCAGTGGC TCCCCACTAC CTGTACAGCA AAGGTTAGCA
CGACAAAACC GTCAACTTAA TCAGGTTGCG AGCCACAATA GAGAGGCGGT ATTACCTTGG
AAAGAATCCA ATTACCAAGC GATTTCCTCA CCCTTGGTGG ATGTTCAAGT TAACGCAGCC
GTCACTGAAC ATAATAACTA TCAAAGTTAT TCAGTCATTG GCGGGCATGA TTTTGCATTT
TTAAGTAGTG AGTTTTATGC CAGTGGTAAT AGTAATGATG CACTGACTGA TTTACGTTTA
ACCCTGTCAA AAGAATCTAC TGCGGGCGAC TTACTCGGTC CGTTAAAGGC GACAGAATTT
AGACTCGGTG ATATTACTCC CGTTAACGTT GGAGTTGATG GCACGCTCGG ACAAAGTCGC
GGTGTTTCAA TAACCAATGA TAAAACGGGT GTATCAGCCA ACAATAGGAC CATCAATCTA
AGCGGTGATA TTCAACCCGG CTGGGACATT GAGCTATATC AAAATGGTTT ACTAATTAAG
CAAGCGCTAA GTTTGCAAAA TGGTCGCTAT GAATTTAACG ACATCGAATT ACTGTATGGT
GATAACCAAT TTGAGATGAT TGCTTATGGC CCCCAAGGGC AGGTTAAAAC TGAAACGAAG
CAGGTGTATG TTGATAGCAA CAAGCTCAAA GCTAACGAGA GCAGCTATAG TGTTTCGCTT
GCTGAAGTTG GTAAAGGGTT GTCGGGTATC TCTAGTATAC CCGAGGATAA CGAAACTGGT
TGGGTATTAA GCTCAACTTA TGAGCATGGT TTAACAGATT GGGCGTCGAT TAATCTAGGT
GTGCAAGAGC AGCTATCAGA GAAAGGAACT TCAGTCGATA CCTATGCTAT CGGTGGTAAT
TTTAATCTGT TTGAACGCTT TCTCTTTGAT GCTGACTATC AAATAGAAGG CAATAGAGAC
AGTTCCTTAG AGCTTTCTGG ACGTACACAG ATTGGTGATC AATCCTTAAG TGTGCGTTAT
CGGGTATCGG AAGACACCGC GGAAGATTTA AGTCAGCGGC AATACACTGA ATATAACTTT
GACCACAGTG GCTTCATGTT TAAACACTCT CCATATCGTC TGAACTATCG CAACCATTGG
CGACAAACTC AAACAAGTAA CGGTACTAGG CACGACGAGT TTGGTAATCT GTTAGCGATG
AATACCCGTT GGGCGAACAT TAATAACCAA TTAACTTGGT ATACAGGCCA ATCTTCTAAT
GACATAGCTT TAGATGACAC GCTAACGGGG CAATTACAGT TACAAAAGAG CTTTGGTTGG
GCATTTAGCC GAGTGAAATT AGACTACTAT ATTAAGCCGG AGACCGAAAT TTCACGTTTC
TCTACCGAGT TGGCGATCCC CATTAATACC AATCTGCAGT CTGAACTAGA GATAGATTAC
TACCCCGTTA CGGAACTTCT AAGTAGCAGT GCTAGCTTAA GCTGGCAACA TGATGCCTTT
AGCCTCAATT CTACAGTTTC TTACGACAAT ACCGGAGATT GGTCATTGGG GCTTTATGGC
CGCTTTAGCT TTGGCTATGA GCCCGATACT GAGCAGATTT TTATGTCATC GCGCAGCTTA
TCGGGAGCAG GGGCATTGAT GGTGCGAGTA TTTGAAGATG ATAACCTTAA TGGTCGATTC
GACGCCGGTG AAGCGGTTAT TGAAGGGGCA AGGGTCAAAG GGGTGCAGCA GTACCGCTAT
GGTACAAGTA ACCAAGATGG TGTGGCTATT TTGACTTCGA TGTCTAGCCA GAAAAAAACG
GACATAGTGT TAGACCAAAA GAGCTTGGGC GATCCATTCT TAATTCCGTC AATTCCTGGA
GTGTCAGTCA CGCCAAGGCG CGGCCATATT CAAACCCTCG ATTTCCCTGT GGTTAACGCT
GCCGAAGTTG AAGGCACAGT TTATGTTCGC GAAGTCGATG GTACTGAATC TATAGCGCCT
TATGCCACAG TAAACTTAGT CAATGCCATG GGTGATATTG TAGCGACGAC TGAAACGGAA
TTTGATGGTT ACTACCTATT TACTGATTTG ATCCCAGGCG ATTATCAGCT GTCCATTGAC
GCCAATTATC TTGAACGCAA AAAGTTACGT GGGGAGTCAC AAATAGCGAT TAGTTTGCAA
AATAATGGTG ATGTGATGAA TGGCGCCGAT TTTACTTTTG CAGAGATAAT GATGACTAAG
GGCTACGTGA TGAATTTAGG TAAATTTAAT TCGCTCACCA TGCTAAAAAC CTACTGGCAA
TTGGTTAAGC ATAACTATGA TGACGCCATG AGCCAGCAAG TGTTTTATAT CCAAGATAAG
CAAACAAAAC GTTACGCATT AAACGTAGCG TTTCTGGCAC GTAAACAACA AGCAGAAAAT
GGTTGCTCAC AAATTACTAA ACAAGGTTTG AAGTGCAGTG TCGAACCTTT TGAATTCGAT
TTTGAATCGT AA
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| Protein sequence | MRYRLSYLLL FYVLYSNAGS ANVQPAFIDP VSTQQPEPAL VQNESKLQFS TLNNADVASI
LARLKQSYGL SQQQLQSQAL ILASTTDNNI VQDELPGETL GIPEGEELLL SLYVDSYYLS
DVFAIKSKRN AQFSLMGLFE LIDFPIEVDI GNSIVKGWYL DEERQFLMQL PETGDEVVSV
SVNQQTFQLT AADYSLMADD IYVAGDVIED WFDITFDYSF ADLKVDISSG SPLPVQQRLA
RQNRQLNQVA SHNREAVLPW KESNYQAISS PLVDVQVNAA VTEHNNYQSY SVIGGHDFAF
LSSEFYASGN SNDALTDLRL TLSKESTAGD LLGPLKATEF RLGDITPVNV GVDGTLGQSR
GVSITNDKTG VSANNRTINL SGDIQPGWDI ELYQNGLLIK QALSLQNGRY EFNDIELLYG
DNQFEMIAYG PQGQVKTETK QVYVDSNKLK ANESSYSVSL AEVGKGLSGI SSIPEDNETG
WVLSSTYEHG LTDWASINLG VQEQLSEKGT SVDTYAIGGN FNLFERFLFD ADYQIEGNRD
SSLELSGRTQ IGDQSLSVRY RVSEDTAEDL SQRQYTEYNF DHSGFMFKHS PYRLNYRNHW
RQTQTSNGTR HDEFGNLLAM NTRWANINNQ LTWYTGQSSN DIALDDTLTG QLQLQKSFGW
AFSRVKLDYY IKPETEISRF STELAIPINT NLQSELEIDY YPVTELLSSS ASLSWQHDAF
SLNSTVSYDN TGDWSLGLYG RFSFGYEPDT EQIFMSSRSL SGAGALMVRV FEDDNLNGRF
DAGEAVIEGA RVKGVQQYRY GTSNQDGVAI LTSMSSQKKT DIVLDQKSLG DPFLIPSIPG
VSVTPRRGHI QTLDFPVVNA AEVEGTVYVR EVDGTESIAP YATVNLVNAM GDIVATTETE
FDGYYLFTDL IPGDYQLSID ANYLERKKLR GESQIAISLQ NNGDVMNGAD FTFAEIMMTK
GYVMNLGKFN SLTMLKTYWQ LVKHNYDDAM SQQVFYIQDK QTKRYALNVA FLARKQQAEN
GCSQITKQGL KCSVEPFEFD FES
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