| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0556 |
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| Symbol | |
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| ID | 5660956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 682998 |
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| End bp | 683912 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641235101 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001500419 |
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| Protein GI | 157960385 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAG ACTTAAATTT AGCAGATGTT CGTGCCTTTA CCGTGATTGC GGAAAAGGGC
AGTTTTACAT TAGCAGCCGA AAAGCTCGGT TGTTCTCGCT CTCACCTTTC TAAACAATTA
ACACAGCTTG AGCGCTACCT TGGGGTGACA TTGATTACTC GCACCACGCG AGCCCAGCGG
TTAACTGAGC AGGGACAGTT TTTCTATGAA CGCTGTCAGC ATGCCTTAGA TGTGATGGAG
CAAGCGGTTG CAAAGACGGT CGATGATGCT CACAACCTGC AGGGTAAGAT CAATATCAAC
TGTGTGGGCG GCTATATCGG TGAGGAGATA GTGAATCAGT TGGTGAATGA CTTTATGAGT
CTGCATCCTA ATATTCATAT CCACCTCGAC TTTAGTAGCC AGCGAGTCGA TTTGGTGCTG
GATGAATTTG ATCTAGTCTT TCGAATGGGG GAGCTAGAGG ATTCAGGCTT GGTGGCAAGA
AAGTTGATGG ATATCGCTAA TTGCACCTTG GCATCGCCAA GATATATCGC TAAACATGGT
CGCCCTGAAA ATCCAAAAGA ATTAAAGAGT CATGCCTGTG TAACTGGCTC GGTTTACCAT
TGGAATTATC ATCGCAGATC GGATAAAACT CAGAAGACCG AGGTGACCAT TACTGGGGCA
TTGTTGTGTA AAAATGGCAG AGTAATGAAA AGTAGTGCAT TAGCCGGAAA TGGCATTGTA
CGCCTGCCGG AGATCTATTG TAGTGCAGAG CTAAACAAGG GGGAGTTAGT GCATGTATTC
GATGACTGGA CTATATCGGA TACCCCGCTT TATCTGCTGT ATAGCAAAGA CCAATTTCAG
CCCGCTAGGC TCAGGCAGTT TATAGAATTT ACCACACAGC ACTTTATGAA GTATGTCGAA
TTGCCAAATG CTTAG
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| Protein sequence | MYQDLNLADV RAFTVIAEKG SFTLAAEKLG CSRSHLSKQL TQLERYLGVT LITRTTRAQR
LTEQGQFFYE RCQHALDVME QAVAKTVDDA HNLQGKININ CVGGYIGEEI VNQLVNDFMS
LHPNIHIHLD FSSQRVDLVL DEFDLVFRMG ELEDSGLVAR KLMDIANCTL ASPRYIAKHG
RPENPKELKS HACVTGSVYH WNYHRRSDKT QKTEVTITGA LLCKNGRVMK SSALAGNGIV
RLPEIYCSAE LNKGELVHVF DDWTISDTPL YLLYSKDQFQ PARLRQFIEF TTQHFMKYVE
LPNA
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