Gene Spea_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0548 
Symbol 
ID5660948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp673614 
End bp674207 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content47% 
IMG OID641235093 
ProductATP-dependent protease La 
Protein accessionYP_001500411 
Protein GI157960377 
COG category[R] General function prediction only 
COG ID[COG2802] Uncharacterized protein, similar to the N-terminal domain of Lon protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACTC AAGAGATGGC ATTATTGGCG CACGACGCCT TATTGTTGCC TGGAGGGCGG 
GTCGAGATCC GCGTGATCGC TCCTCGTTGT CTGAATATGA TCGCCGAGAC TCTCAAGGGG 
CATTATCCTC TGGTGTTCGG TATGAGCAAA GCCAATAGTA ACCCTCCCTG CTATGAGACT 
GCCACTCAGT GTGAGGTCAT TGATTTTAAC CAACTCGATG ATGACTCTTT AGGGATTATT 
CTCGAAGGTA AGCAAAGGGT TAAAATTCTT TCAGCGGCTG AGCGTCGAGA TGGAACTTGG 
ATCTGTCGAG TATTGCCAAG CAATAATTGG CAGCAAGAAC CTATCTATGG TGAGTTTGAG 
CTTATCAGCG CCGCACTGCA GCAGTTTTAT GAGGTCAATC CTGAGCTATT CGGCCTGTAT 
GAGAACGATA TCCATCTCGA AGATGCTTCT TGGGTCAGTC AGCGCTGGTT AGAAGTGTTA 
CCACTGTATA ATCAGGATAA ATTACGTCTG CTCAATCAGC CTAACTGCCA TAAGACGATG 
AACTTCGTAT TAGAGCTAAT CAAGTCTCAC GCTAGAGACA ATCCTCACTC TTAG
 
Protein sequence
MQTQEMALLA HDALLLPGGR VEIRVIAPRC LNMIAETLKG HYPLVFGMSK ANSNPPCYET 
ATQCEVIDFN QLDDDSLGII LEGKQRVKIL SAAERRDGTW ICRVLPSNNW QQEPIYGEFE 
LISAALQQFY EVNPELFGLY ENDIHLEDAS WVSQRWLEVL PLYNQDKLRL LNQPNCHKTM 
NFVLELIKSH ARDNPHS