Gene Spea_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0534 
Symbol 
ID5660934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp657864 
End bp658310 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content49% 
IMG OID641235079 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001500397 
Protein GI157960363 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000293709 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAC CCAAGATCTT ATTAGTAAAT GGTCCTAACT TAAACCTACT CGGACGCCGT 
GAACCGGGCC ACTATGGTCA CCATACCCTA GAGCAGATCG TCGATGAGCT TAAGCAAAAT 
GCAGCTCAGG CGGGTGTGCA GTTAGAGCAT ATTCAATCTA ACGCCGAGCA CTTACTTATC 
GAGGCGATTC ATAACAGTGA CGCCGATATG GTGATCATCA ACCCGGCGGC TTTTACCCAT 
ACCAGCGTTG CATTGAGAGA TGCCCTACTT GGTGTCGCAA TCCCTTTTAT TGAGGTGCAC 
CTTTCCAACG TGCACAGCCG TGAGCCTTTC CGCCACCACT CCTACTTTTC AGATAAAGCC 
ATAGGGGTGA TCTGTGGCTT AGGTGCTCAA GGCTATCAAT TTGCGCTACA AGCCGCGATT 
GCACGTATTA ATGCGGCAGA TAAATAA
 
Protein sequence
MSQPKILLVN GPNLNLLGRR EPGHYGHHTL EQIVDELKQN AAQAGVQLEH IQSNAEHLLI 
EAIHNSDADM VIINPAAFTH TSVALRDALL GVAIPFIEVH LSNVHSREPF RHHSYFSDKA 
IGVICGLGAQ GYQFALQAAI ARINAADK