| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0387 |
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| Symbol | |
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| ID | 5660787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 465965 |
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| End bp | 469120 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641234921 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001500250 |
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| Protein GI | 157960216 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAT CAGTATTGCG TCTTGCGATA AATAGACGCT GGATGATGAT GTTCCTTGCC
ATGCTGCTGG TTGCAGTGGG GCTATGGAGT TATCAGAAGT TACCTATCGA TGCGGTGCCA
GATATTACCA ACGTACAGGT GCAAATTAGC ACCCGCGCCG AGGGATATTC TCCGCAAGAA
ACCGAGCAAA GAATTACGTA CCCGATTGAA AATGCCTTGA TGGGGATCCC GCACCTAGCG
AATACCCGCT CGTTGTCGCG TTATGGATTA TCACAGGTCA CAGTGGTGTT TGATGAAGGC
ACAGACTTAT ATTTTGCACG TAATCTTATC AGCGAGCGCT TAAACGGTAT TAAAGGCAAG
TTACCCGCCG AGATTGAGCC TGAGATGGGG CCTATATCAA CCGGGCTTGG TGAGATCTAC
ATGTACACCA TCGAAGCGCT GCCTGATGCG AAGCAAGCCG ATGGAAGTGA TTTTGATGCG
ACTGCGCTAA GAGAGATCCA AGATTGGATC ATTAAACCTC AGCTAGCTCA AGTGCCAGGT
GTTACTGAAA TTAACACCAT CGGAGGGTAC GACAAGGAGT ACCACATTAC GCCACTGCCA
GCCAATATGC TGCAATACGG CGTGTCATTT GTGGATATTA AGCTGGCACT ACAAAGCAGC
AATAGTAATC GTGGAGCGGG CTATATCGAG CGAGACGGCC AGCAACTTAC GGTGCGCTCT
GCTGCCCAGC TTAAGACCAT TAGCGACATT GAAAACGTTG TCGTTAAGCA TATCGATAGC
GCGCCAATCT TAATCGCCGA TGTGGCTCAG GTGGCAATTG GTAAGGCACT ACGTACTGGC
GCCGCGACTC GTGATGGCAA AGAAACGGTA CTAGGCAGTG CCATGATGCT GGTGGGTGAA
AACTCACGTC AGGTGTCACT CGCCGTAGCC GCCAAGCTTG AAGATGTTAA AGCATCGCTA
CCCGATGGTA TTAAGGTTGA AGCTGTGTAC GATCGCACCA CCTTGGTAGA CAAAGCGGTA
TACACGGTGC AGAAGAACCT AGTTGAAGGC GCGCTGCTAG TCATAGTGGT GCTGTTTATT
TTACTGGGTA ACGCTAGAGC GGCATTGATC ACCGCTGCGG TAATTCCGCT GGCGATGTTA
GCAACCATGA CTGGTATGGT GCAGGCCGGT GTTTCGGCTA ACCTAATGAG TCTTGGCGCA
TTAGATTTTG GTTTGATAGT CGATGGCGCG GTAATTATTG TTGAAAATGC CATTCGCAGG
CTTGGTCAGG CTCAAGTACA AAATGGCGGT CATGTGCTAC CACGTAAGCA GCGCTTGCAA
CTAGTGTTTG AGGCCACCAA TGAGGTGATC CGCCCGAGTT TGTTTGGCGT GTTGATTATT
ACCGTTGTGT ACATTCCGCT GTTTAGCCTT ACAGGCGTTG AAGGCAAGAT GTTCCACCCC
ATGGCGGCAA CGGTTGTGAT GGCTCTGCTA GCGGCGTTAG TGTTGTCGTT AACTTTGGTT
CCCGCTGCGG TTGCCCTGTT TATGACAGGC AAAATTAGCG ATAAAGAAAG CCGAGTGATT
ACCGCGACTA AGTCACTGTA CAAGCCGTTA TTAATCGGTG CGATGAAGTT ACGTTGGTTG
GTACTTAGTG CGGCAGTAGC CTTGGTTGGC TTCTCTATTT GGCTGGCAAC GACTCTTGGA
TCTGAGTTTA TTCCTCAGCT CAATGAAGAG GATATCTTGT TGCAAGCTAT CCGTATTCCG
GGTACAGGGC TAGAGCAATC GGTGGACATG CAGGTCTTAC TAGAAGATCG CATCAAACAC
TTCCCACAGG TGTTAAATGT ATTTTCTAAG ATAGGTACCC CAGAGGTGGC GAACGATCCT
ATGCCACCGA ATATTGCCGA CACCTTCATT ATGCTTAAGC CGCGAAATGA ATGGCCTAAT
CCTAAGATGA GCCATGACGC GCTTGCGGCC GATATCGTTG CTGCGGTTTC TGGCCAGCCG
GGTAATAACT TTGAGTTAAC CCAACCTATT GAGATGCGTT TTAATGAATT GATCTCGGGG
GTGCGTGCAG ACTTAGGTAT TAAGGTCGTG GGTGATGACT TAGATCAGTT ATTAGCTTCG
GCCAATGCTA TTCGTGAAGT GCTAGAGAAA ATTGATGGCG CAGCCGATCT ACAAGTTGAG
CAAGTAACTG GTTTACCTAT GCTATCTATT CAGCCAGATC GTATGGCTTT AGCCCGTTAC
GGTTTAACGG TTAGCGAACT ACAGGACTTT GTGGCAACGG CTATAGGCGG CGAAGAGGCA
GGGCTTATCT TTGAAGGCGA TCGTCGCTTC AAGATGGTTG TACGTTTACC TGAAGCTATC
CGTAAAGATG TCGAACACTT ACAAGAGCTG CCAATTGTGC TGCCATCAGG TGAATATGTG
CCTTTGTCTG AGGTGGCGAG GCTAGATATT GCACCATCAC CAAACCAGAT CAGTCGTGAA
AACGGTAAAC GTCGCATTGT GGTGACTGCC AACGTGCGCG GCCGCGACTT GGGTACCTTT
GTTAGTGAAG TTAAACAGCA AGTTGCTGAG CAAGTTGATA TTCCTGCAGG CTATTGGCTG
GAGTATGGCG GCACCTTTGA GCAACTTGAA TCCGCGAGTC AGCGTTTATC TATTGTGGTT
CCGTTAACGC TAGCGCTCAT TTTAGGCTTG TTGGTGATGG CCTTTAGTTC GGTAAAGGAT
GCGCTAATTA TCTTTACCGG AATACCTCTA GCACTAACTG GCGGGGTGAT TTCACTATGG
ATGCGGGATA TGCCGTTGTC GATTTCGGCA GGTGTCGGCT TTATTGCGCT TTCTGGTGTG
GCAGTGCTGA ATGGCTTAGT GCTACTGAGC TTTATCCGTC AGTTATACCA AGAGAAAGGT
GAGCTGATGG CAGCGATTAT CGATGGCGCT TTGATTCGAC TACGTCCGGT ATTGATGACA
GCGTTAGTGG CAGGGCTTGG TTTTGTGCCA ATGGCGCTTA ATATCGGCAC TGGCGCAGAG
GTGCAGCGCC CAATTGCGAC AGTAGTGATT GGCGGTATTA TCTCATCGAC GATATTAACC
CTGTTTGTCT TGCCTATTTT GTATCGTATG GCGCATCAGC GCGATGAGAA CAGAAAGAGT
AAGCAGGCTA ATGTTGAGAG TGCAGCTACT ACATAA
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| Protein sequence | MIESVLRLAI NRRWMMMFLA MLLVAVGLWS YQKLPIDAVP DITNVQVQIS TRAEGYSPQE
TEQRITYPIE NALMGIPHLA NTRSLSRYGL SQVTVVFDEG TDLYFARNLI SERLNGIKGK
LPAEIEPEMG PISTGLGEIY MYTIEALPDA KQADGSDFDA TALREIQDWI IKPQLAQVPG
VTEINTIGGY DKEYHITPLP ANMLQYGVSF VDIKLALQSS NSNRGAGYIE RDGQQLTVRS
AAQLKTISDI ENVVVKHIDS APILIADVAQ VAIGKALRTG AATRDGKETV LGSAMMLVGE
NSRQVSLAVA AKLEDVKASL PDGIKVEAVY DRTTLVDKAV YTVQKNLVEG ALLVIVVLFI
LLGNARAALI TAAVIPLAML ATMTGMVQAG VSANLMSLGA LDFGLIVDGA VIIVENAIRR
LGQAQVQNGG HVLPRKQRLQ LVFEATNEVI RPSLFGVLII TVVYIPLFSL TGVEGKMFHP
MAATVVMALL AALVLSLTLV PAAVALFMTG KISDKESRVI TATKSLYKPL LIGAMKLRWL
VLSAAVALVG FSIWLATTLG SEFIPQLNEE DILLQAIRIP GTGLEQSVDM QVLLEDRIKH
FPQVLNVFSK IGTPEVANDP MPPNIADTFI MLKPRNEWPN PKMSHDALAA DIVAAVSGQP
GNNFELTQPI EMRFNELISG VRADLGIKVV GDDLDQLLAS ANAIREVLEK IDGAADLQVE
QVTGLPMLSI QPDRMALARY GLTVSELQDF VATAIGGEEA GLIFEGDRRF KMVVRLPEAI
RKDVEHLQEL PIVLPSGEYV PLSEVARLDI APSPNQISRE NGKRRIVVTA NVRGRDLGTF
VSEVKQQVAE QVDIPAGYWL EYGGTFEQLE SASQRLSIVV PLTLALILGL LVMAFSSVKD
ALIIFTGIPL ALTGGVISLW MRDMPLSISA GVGFIALSGV AVLNGLVLLS FIRQLYQEKG
ELMAAIIDGA LIRLRPVLMT ALVAGLGFVP MALNIGTGAE VQRPIATVVI GGIISSTILT
LFVLPILYRM AHQRDENRKS KQANVESAAT T
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