| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0385 |
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| Symbol | |
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| ID | 5660785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 463306 |
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| End bp | 464730 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641234919 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001500248 |
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| Protein GI | 157960214 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTATA ATACTTATTG CACGAAATCT GCCACAAAAA TCGGCATACT TTGTGTTTGG
CGAGGGCTCT ATTGCACCTT GGCGCTCATC GCTCTGTTAT GGGCGGGCTC ACTTGCCGCG
GCTACTGCTA ACACTGCACC GGCTAATACC TTGTCGTTAA CCACGGTTAT TGAACGGGTA
CAACTGCAAC ACCCTTCACT GAAGGTTTTT CAGTTTAGAC AACAAGCGCT CGATGGTGCG
GCGCACACCC AAGCGCTAAC TCCTGGTTAT GAGATTGGAT TTGATCTCGA TAACGTTGCG
GGCTCTGGTG AATTCCAAGG TATCGACAGT GCTGAGTTTA GTGTGTCTTT ATCGTCGGTG
ATTGAACTGG GTGACAAACT TGATGCTCGC ACTGGTGTTG TCAATGAGCA GCGTGCCGTA
CTGGATGCTG AGCAGAAAAT TACCGCGTTA AATTTACTTG CAGAAGCAAC GCGTCGCTAT
ATCGATGTGT TAGCGGCGCA ATCGCAACTG CAATTAGCGG TCGATGCATT ACAGCTTGCC
GAGGAAACCC AAGTAGTAGT GGCTAAGCGA GCAAAGGCTG GCGTGACGCC AGACGCCGAA
GTTAAGCGCG CCCAAGCTGC GGTATTTAAT GCCCGTCTCG TGGCAGAAAC CCAATTACAC
CAGCTCGATT ACGCCAAGCT TGCGCTAAGC ATGATGTGGG GCGAGTCTCA GATTAGCTTT
GATTCACTCG AAGGGGGCTT ATTTGCCTTT ACCGACGATG TGGCACTCGA GCCGTTATTT
GAGAAAGTAA AATACAGCCC TGCTATCACA GCCTATTTGA CTCAGGCACA ACTTAAAGAG
GCCGAGCTGC GTTTTGCCAA AACTCAGTCA AGTAGCGATA TCAGTTGGTC TGTAGGCGTT
AAACAACTAC AGCAAACCAA CGATATGGCA TTGTCTGCGG GCTTTAGTAT GCCGCTGTTT
AATGGCGAAC GTAATACTGG CACCGTGCTT TCGGCTCAGG CCGCAAAAGA GCAAGTACTT
GTCAACCGAG AAGTGGCTCT TTTAGAGCTA TATGGTCAAC TGTACCGGGC TTATGCTAGC
CGTAAACAAG CCATAGTGAC GGTAAATCGA CTACAGGCTA GTGTGATCCC GACCTTAACC
TCAGCCCTTG AAGATACCAA GCAAGCTTAC GAGCAGGGGC TTTACAGCTA TCTTGATTAC
TTAACCGCCC GAGAGGAGCT GTTATTTGCA CGCCGTGCGC TAATTGATGC TGCGGCCTCT
GCACTGCGTT ATGGCGTGGA TATTGAGCAG CTTATTGCTG AGCCATTACC TGCTTCTCAA
CATACCTTCT TCAATGATTT TTCAAATGCA GCCAACTCTT CTGCGACTGC TGATTTCTCA
AAGTCAGCTA ATTTTTCTGA CGCTGCAAAA GGACATACAA AATGA
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| Protein sequence | MFYNTYCTKS ATKIGILCVW RGLYCTLALI ALLWAGSLAA ATANTAPANT LSLTTVIERV
QLQHPSLKVF QFRQQALDGA AHTQALTPGY EIGFDLDNVA GSGEFQGIDS AEFSVSLSSV
IELGDKLDAR TGVVNEQRAV LDAEQKITAL NLLAEATRRY IDVLAAQSQL QLAVDALQLA
EETQVVVAKR AKAGVTPDAE VKRAQAAVFN ARLVAETQLH QLDYAKLALS MMWGESQISF
DSLEGGLFAF TDDVALEPLF EKVKYSPAIT AYLTQAQLKE AELRFAKTQS SSDISWSVGV
KQLQQTNDMA LSAGFSMPLF NGERNTGTVL SAQAAKEQVL VNREVALLEL YGQLYRAYAS
RKQAIVTVNR LQASVIPTLT SALEDTKQAY EQGLYSYLDY LTAREELLFA RRALIDAAAS
ALRYGVDIEQ LIAEPLPASQ HTFFNDFSNA ANSSATADFS KSANFSDAAK GHTK
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