Gene Spea_0369 details

Gene Information

• Locus tag: Spea_0369
• ID: 5660769
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: -
• Start bp: 442471
• End bp: 448674
• Gene Length: 6204 bp
• Protein Length: 2067 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641234903
• Product: putative outer membrane adhesin like proteiin
• Protein accession: YP_001500232
• Protein GI: 157960198
• TIGRFAM ID: [TIGR01965] VCBS repeat; [TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass)

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.936845
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGGATA CCTATACGCT TAAGCAGGAT GCCACAATTG TTGAGCTGTC CGGCGATATC 
AATACCAAAA ACAACCAAGG AGATGATGTA AAACTTCGCC TTGGTGACAC CTTAAAACAA 
AATGCGACTT TTACCGTTTC TGCTGGTACC ACTTTCACCT TGCAATACAG TGATGGCACC 
GCCGCCACAC AAGATGACTT AGCCATTAAC CCTATCGTTA CTGACAATGA TGCTCAGTCG 
AGCGAAGCAT TAGCAGCGGC AGTCGATCCT GAAGTCGTGG TTCCTGAAAT AGCAGCCTTA 
CAGGCTCAGA TCCTTAGTGG TGAAGATCCA ACCGAAAACC TACCCGATAC AGCGGCAGGT 
GAAACGGCTC AAGCTGGAAA TGAAGGTGGT GGCTATGTTG CCGTTGGCCG TACAGGTGAC 
GAAACCCTTG CCAATGCAGG CCATGACACC GCAGGATTTG AACAGATTGA ACTCCCACGG 
ATAGATGAAT TACCCGTGTT TTTAACGGAG TTTGCGTTAC CTAAGGTCTC TGCACGTGCT 
GTCACCCTAT TTGAGAAACA TCTAGAGCAA GGTTCGGAAC CTCAAGCAGC ACAATTATCC 
CAGGCTGAAA ACGTATCTGT TAATGTTCAG GCTGGGATCC AAGACCTTAG CATTAATGGA 
GTCGTCGTAT TTGAACAGGG CAACTTTGTT GGCCCTGTGG TCATCACGAC TCCAAATGGC 
GTTTTACTCA TTAGCGCCTA TGACTCTATA GACTCAATAT TAACCTATAG CTATACCCTA 
TCTTCAACGC TAGATCATTC GAACTCTGAT ACGATCGCAG AAATATTTGT ATTACAGCTA 
ACTGATAATC AGGGAGTTAG CACAACCTCT GTCGTCACCG CAAATATTGT TGATGACGCG 
CCCAGCGGCT TAGATGACAT CAATGTGATC AGTCAAAGCA ACCTTGATGG TGTAGGCGGG 
AATGTACTAC AAAACGATAC TCTAGGTGCC GACTTAGCTG CAGTAACCCA AATAATTAAC 
AGCCAGAATA GTAGCAATGA CGTTGCTGAG AGTACTGCTA TATCGGGTAT TTATGGTTCA 
TTAATCATTG CTGCTGACGG TAGTTATCAC TACCAATTAA ATAACCAATT ACCGGAGATT 
CAATCACTCG CTCTCGGTGA ACAGCTAATC GAATCATTTA ACTATCTACT GACGGATAGT 
GATGGTGATT CAGTCACACA GGCGCTAACT ATCACCATAT CAGGTGAAAA TGATGCTCCA 
GAGATCACTA GTTCATTTGA AGATGCATTG GGTAATGTTA CCGAAGCAGG TGTTTTAGTC 
GGTGGCAATA TAGCAACAGA TGGTATTCCA CAAGCTAGCG GTACACTAAC CGCCGATGAC 
GTCGATAATG GTGCCGTACT TACTTGGCAA CTCAATGATG ACCCAGTTAC TCCATACGGT 
ATCTTTACCC TCAACGAGTC TACAGGTGCG TGGTCATTCA CTTTGGATAA CGAATTCGCT 
AACAGTCTCG GTTATGGCGA TACAGAAACT GAAATCTTTA ACATAACAGT GACTGATGAG 
TTCGGCTTAT CTGATACTCA AATGTTCACT GTAACCATCA CTGGTACCAA CGATATTCCA 
GTGCTGTCTT TTGCCCAAGG TGCAGACACT GGCATAGTGA AAGAAGCAGG GGTGGTTGAT 
ATCAATGATG AAGGTAACAC TCCCGTTGCG GGCATCGATA GCGTTTCTGG ACAGTTCAAC 
GCCGACGATG TTGACATCAA TGACGGTGAA ACTTGGAGTG TACAAGGTAC ACCAAACACC 
GAATACGGGC AGTTCTCAGT TGATAGTAAC GGCTTATGGA CCTACGCCCT TGATAATGAT 
TTAGCCAACA GTCTGTTTGA AGGCCAAGTT GTAGTCCTCA ACTACAGCGT GCGCGTGACC 
GATAACTACG GCGCCTATGC AGACCAAGAC GTGAACATTA CCATCACTGG TACCAACGAT 
ATTCCCGTGC TTTCATTTGA AGAAGGCGCT GACGCTGGCA TAGTGAAAGA AGCCGGTGTG 
GTTGATATCA ATGATGAAGG TAACACTGCC GTTGCGGGCA TCGATAGCGT TTCAGGACAG 
CTCAACGCCG ACGATGTTGA CATCAATGAC GGTGAAACTT GGAGCGTACA AGGTACACCA 
AACACCGAAT ATGGGCAGTT CTCTGTTGAT AGTAACGGCT TATGGACCTA CGCCCTTGAT 
AATGATTTAG CCGACAGCTT GTTTGAAGGC CAAGTTGTGA TCCTCAATTA CACCGTGCGC 
GTGACCGATA ACTACGGCGC CTATGCAGAC CAAGACGTGA CCATTACCAT CACTGGGACC 
AACGATATTC CAGTGCTGTC TTTTGAGGAA GGTGCTGACG CCGGCATAGT AAAAGAAGCT 
GGTGTAGTTG ATATCAATGA TGAAGGTAAC ACTCCGGTTG CGGGTATCGA TAGTGTTTCA 
GGACAGTTCA ACGCAGACGA TGTTGACATC AATGACGGTG AAACTTGGAG TGTACAAGGT 
ACGCCAAACA CCGAATACGG GCAGTTCTCA GTCGATAGTA ATGGCTTATG GACCTACGCC 
CTTGATAATG ATTTAGCCGA CAGCTTGTTT GAAGGCCAAG TTGTGATCCT CAATTACACC 
GTGCGCGTGA CAGATAACTA CGGCGCCTAT GCAGACCAAG ACGTGACCAT TACCATCACT 
GGGACCAACG ATATTCCAGT GCTGTCATTT GAAGAAGGCG CTGACGCCGG CATAGTGAAA 
GAAGCTGGTG TGGTTGATAT CAATGATGAA GGTAACACTT CCGTTGCGGG CATCGATAGC 
GTTTCAGGAC AGTTCAACGC CGACGATGTT GACATCAATG ACGGTGAAAC TTGGAGTGTA 
CAAGGTACGC CAAACACCGA ATATGGGCAG TTCTCTGTTG ATAGTAACGG CTTATGGACC 
TACGCCCTTG ATAATGATTT AGCCGACAGC TTGTTTGAAG GCCAAGTTGT GATCCTCAAT 
TACACCGTGC GCGTGACCGA TAACTACGGC GCCTATGCAG ACCAAGACGT GAACATTACC 
ATCACTGGGA CCAACGATAT TCCAGTGCTG TCATTTGAAG AAGGCGCTGA CGCCGGCATA 
GTGAAAGAAG CTGGTGTGGT TGATATCAAT GATGAAGGTA ACACTCCCGT TGCGGGCATC 
GATAGCGTTT CAGGACAGTT CAACGCCGAC GATGTTGACA TCAATGACGG TGAAACTTGG 
AGCGTACAAG GTACGCCAAA CACCGAATAT GGGCAGTTCT CTGTTGATAG TAACGGCTTA 
TGGACCTACG CCCTTGATAA TGATTTAGCC GACAGCTTGT TTGAAGGCCA AGTTGTGGTT 
CTCAATTACA CCGTGCGCGT GACCGATAAC TACGGCGCCT ATGCAGACCA AGACGTGAAC 
ATTACCATCA CTGGTACCAA CGATATTCCA GTGCTGTCTT TTGAAGAAGG CGCTGACGCT 
GGCATAGTGA AAGAAGCTGG TGTGGTTGAT ATCAATGATG AAGGTAACAC TCCCGTTGCG 
GGTATCGATA GCGTTTCAGG ACAGTTCAAC GCCGACGATG TTGACATCAA TGACGGTGAA 
ACTTGGAGCG TACAAGGTAC ACCAAACACC GAATATGGAC AGTTCTCTGT TGATAGTAAC 
GGCTTATGGA CCTACGCCCT TGATAATGAT TTAGCCGACA ATCTGTTTGA AGGCCAAGTT 
GTTGTTCTCA ATTACACGGT GCGCGTGACC GATAACTACG GCGCCTATGC AGACCAAGAC 
GTGACCATTA CCATCACTGG GACCAACGAT ATTCCAGTGC TGTCTTTTGA AGAAGGCGCT 
GACGCCGGCA TAGTGAAAGA AGCTGGTGTG GTTGATATCA ATGATGAAGG TAACACTCCC 
GTTGCGGGTA TCGATAGCGT TTCTGGACAG TTCAACGCCG ACGATGTTGA CATCAATGAC 
GGTGAAACTT GGAGCGTACA AGGTACACCA AACACCGAAT ACGGGCAGTT CTCTGTTGAT 
AGTAACGGCT TATGGACCTA CGCCCTTGAT AATGATTTAG CCGACAGTCT GTTTGAAGGC 
CAAGTTGTTG TTCTCAATTA CACAGTGCGC GTGACAGATA ACTACGGCGC CTATGCCGAC 
CAAAACGTGA CCATTACTTT AGAGGGCACT AACGATATTC CTGAGCTGAC GGCAGATACA 
TCCGGAGCAG TAACCGAGGA CCTTAATGTC GTTAACCAGT TAATCAGTGA TAGCGGAGCA 
CTCAGCTTTA CAGACGTAGA CACTGGCGAT ACTGCATTAG TCAGCTCAGA TTACAAGGGA 
GACATTGCTT GGAGCGGTGG TGATTTAAGC TTGGTGCTAA CCCAAGATCA AATAGATCAA 
ATTGTGGATG GCTTTTCTGC AGATCAAGAT AGCTGGGATT TCAGTGTTGC CAATGACCTA 
ATACAGTTTC TCGCAGCGAC GGAATCAATT AGCTTAAGTT TTGACGTTAC TGTTACCGAC 
ACATACGGGG CTTATGACAC TGAAGAAGTC ACAATCACCA TTAGCGGCGT CAACGATGGC 
ATTGAAGGTG AATTTGAAAA AGAAATATGG GTTCCAGCTT CTCTCAATGA GATAACGGAT 
CCTTATTTAA GCGGCTACCC TCTATTCATC GCTATGCCGA CTGATATCGA CTTCAATGAC 
TCAATCTCCA TATCGAACTT AGCAATAACC CTGTTAACCC AAGGGTTAGA CCCTGACGTA 
GAATTGGGTA ACATTTATTA TATGGCCGAT GGTGATAACA CACTGTCACT GATTGATTTT 
AATTCCCCGC CAATACTAAG TGCCTCAGAA TTAGAAACCT TGCTATACGT GCCTGGCGAT 
AATGGTGATG TTGACTATCA AGTCGATCTT GCTTTCACAT TCCAAGTCAA CTCTGGCATA 
GATTCTGTCG ATGGAGAGTT CATCATTCAT TCTGTCCCTG CAAATGGGCT AGCAGATCAA 
ACTGTGCAAA TTGGTGATGG TTCGAGCCCT CTGACCTCAG GTAATCCTCA GGATGCAGAT 
TTAGTAATAA CAGAATTGTT TGCTAATGCT CTCAATTCGG ATCCAGCCAG TGGTTCATTA 
CTCTTATTTA CCGATTTTCA ACAAACTCCT GTAACGGTTC CGGTTCCTAT TAACGAACGA 
GGTGCTAATA CCAATGCCGG TGCTGCCCGA GAAATGGAGG TCTCAGCGAG ACTAACAATT 
GGCAGTGCCA TCTTCGAGGT CATTCCCGAC AATGATGGAG ATGGCATTAT CACCTGGAGC 
TATGATGCCG ACTCAGGCCT AATGAAGGCT GAAGTCGACT ACTCGGCCAT CTACCTACTC 
GACGGTAACG GTGACCCAAC CACTACCTCT TTAGCCGATT ACATTATTGC AAACCCTGTC 
GTAGCAAATG ACATCTGGCG CATAACATAC CTAGATAATA ATGGCGGTAA TTTCCAGGCT 
AGATTTGTCG AAGCCGTCTT TACCCATGAG CAAATAGCTG ATGACTCAAT AACGGTTGTA 
GGCACAGATA ACATCAACAA CCTTATTTTT GGTAGTACCA ATACCGATTC CTTAACGGGG 
GCGAATCTAG ATGATCGCAT TTTCGGTAGA GAAGATAATG ATATTTTAAT AGGCCTATCG 
GGTAATGACG AACTTATTGG CGGCTCTGGT GATGATAATA TCCAAGGCGG TGAAGATAAC 
GACTTTGTCA TAGGTGGTAT AGGAGATGAC CTACTAGACG GAGGCGTTGG TAGGGATTAC 
TTATCTGGTG GGCAAGGCAA CGACAGCCTA GATGGAGGTG AGTTAAACGG CAGTGATGAC 
GGTGAACGAG ACTTCTTTGT ATGGGAGTCT GACACCGCAG ATAACAGCAC TGATACAGTA 
TTTAACTTTA ATCCTGATAT TGATGTTCTA GATCTATCGG ACCTGTTAAT CGGTGAAGAG 
AGTGGAAACC TAGAAGACTT CTTATTCTTT AGCTTCAGCG GAGGCAACAC CACTATCACT 
GTTGATGCCG ATGGGCTTGG AGTTGGCACA GATAGCGTGA TGATCGTTCT CGACGGTATC 
GATCTATCGA GTATTTATGG CTCAGCAGAT GCGAGCATTA TCATTGCCGA GCTTATTACT 
GATGAAGCGT TAATTGTCGA TCCAAATACG AGCCCTTTTA TCCCGCCCTA TGATCAAATT 
GATGATGGGT TAAATCTACC CTAA 

 

Protein sequence

MMDTYTLKQD ATIVELSGDI NTKNNQGDDV KLRLGDTLKQ NATFTVSAGT TFTLQYSDGT 
AATQDDLAIN PIVTDNDAQS SEALAAAVDP EVVVPEIAAL QAQILSGEDP TENLPDTAAG 
ETAQAGNEGG GYVAVGRTGD ETLANAGHDT AGFEQIELPR IDELPVFLTE FALPKVSARA 
VTLFEKHLEQ GSEPQAAQLS QAENVSVNVQ AGIQDLSING VVVFEQGNFV GPVVITTPNG 
VLLISAYDSI DSILTYSYTL SSTLDHSNSD TIAEIFVLQL TDNQGVSTTS VVTANIVDDA 
PSGLDDINVI SQSNLDGVGG NVLQNDTLGA DLAAVTQIIN SQNSSNDVAE STAISGIYGS 
LIIAADGSYH YQLNNQLPEI QSLALGEQLI ESFNYLLTDS DGDSVTQALT ITISGENDAP 
EITSSFEDAL GNVTEAGVLV GGNIATDGIP QASGTLTADD VDNGAVLTWQ LNDDPVTPYG 
IFTLNESTGA WSFTLDNEFA NSLGYGDTET EIFNITVTDE FGLSDTQMFT VTITGTNDIP 
VLSFAQGADT GIVKEAGVVD INDEGNTPVA GIDSVSGQFN ADDVDINDGE TWSVQGTPNT 
EYGQFSVDSN GLWTYALDND LANSLFEGQV VVLNYSVRVT DNYGAYADQD VNITITGTND 
IPVLSFEEGA DAGIVKEAGV VDINDEGNTA VAGIDSVSGQ LNADDVDIND GETWSVQGTP 
NTEYGQFSVD SNGLWTYALD NDLADSLFEG QVVILNYTVR VTDNYGAYAD QDVTITITGT 
NDIPVLSFEE GADAGIVKEA GVVDINDEGN TPVAGIDSVS GQFNADDVDI NDGETWSVQG 
TPNTEYGQFS VDSNGLWTYA LDNDLADSLF EGQVVILNYT VRVTDNYGAY ADQDVTITIT 
GTNDIPVLSF EEGADAGIVK EAGVVDINDE GNTSVAGIDS VSGQFNADDV DINDGETWSV 
QGTPNTEYGQ FSVDSNGLWT YALDNDLADS LFEGQVVILN YTVRVTDNYG AYADQDVNIT 
ITGTNDIPVL SFEEGADAGI VKEAGVVDIN DEGNTPVAGI DSVSGQFNAD DVDINDGETW 
SVQGTPNTEY GQFSVDSNGL WTYALDNDLA DSLFEGQVVV LNYTVRVTDN YGAYADQDVN 
ITITGTNDIP VLSFEEGADA GIVKEAGVVD INDEGNTPVA GIDSVSGQFN ADDVDINDGE 
TWSVQGTPNT EYGQFSVDSN GLWTYALDND LADNLFEGQV VVLNYTVRVT DNYGAYADQD 
VTITITGTND IPVLSFEEGA DAGIVKEAGV VDINDEGNTP VAGIDSVSGQ FNADDVDIND 
GETWSVQGTP NTEYGQFSVD SNGLWTYALD NDLADSLFEG QVVVLNYTVR VTDNYGAYAD 
QNVTITLEGT NDIPELTADT SGAVTEDLNV VNQLISDSGA LSFTDVDTGD TALVSSDYKG 
DIAWSGGDLS LVLTQDQIDQ IVDGFSADQD SWDFSVANDL IQFLAATESI SLSFDVTVTD 
TYGAYDTEEV TITISGVNDG IEGEFEKEIW VPASLNEITD PYLSGYPLFI AMPTDIDFND 
SISISNLAIT LLTQGLDPDV ELGNIYYMAD GDNTLSLIDF NSPPILSASE LETLLYVPGD 
NGDVDYQVDL AFTFQVNSGI DSVDGEFIIH SVPANGLADQ TVQIGDGSSP LTSGNPQDAD 
LVITELFANA LNSDPASGSL LLFTDFQQTP VTVPVPINER GANTNAGAAR EMEVSARLTI 
GSAIFEVIPD NDGDGIITWS YDADSGLMKA EVDYSAIYLL DGNGDPTTTS LADYIIANPV 
VANDIWRITY LDNNGGNFQA RFVEAVFTHE QIADDSITVV GTDNINNLIF GSTNTDSLTG 
ANLDDRIFGR EDNDILIGLS GNDELIGGSG DDNIQGGEDN DFVIGGIGDD LLDGGVGRDY 
LSGGQGNDSL DGGELNGSDD GERDFFVWES DTADNSTDTV FNFNPDIDVL DLSDLLIGEE 
SGNLEDFLFF SFSGGNTTIT VDADGLGVGT DSVMIVLDGI DLSSIYGSAD ASIIIAELIT 
DEALIVDPNT SPFIPPYDQI DDGLNLP