| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0342 |
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| Symbol | |
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| ID | 5660742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 387020 |
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| End bp | 388027 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234872 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001500205 |
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| Protein GI | 157960171 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACCG ATAGCGTATG TTTGCAAACC CTTTATGATA TGACCTATAA CTTGCGTCAT
TTGCAAAGGC CTATTGTGAA ACAGTTAGAT TTCAATTTAC TCAGAGTGTT AGAAGTACTG
CTTGAAGAGC AGAGTGTCAC CTCCGCTGCG ACGAGATTGC ATTTGAGTCA GTCAGCGGTG
AGTAAACAGC TGAGTAAGTT GAGAGAAACC TTCGATGACC AGCTATTTGA ACGCACAGCC
TATGGATTGA AAGCCACCCC ACGTGCTCTG CAGTTAGCCC CAGAGCTTCG CGAGGTACTG
CAAAAGCTAG ATCAATTTAC CCGTCCTAGC ACCTTTGAGC CCGCCGAGAG TCAGCGACGT
TTTCGTATGC ATATTGTTGA AACAGCTTAT TCGCTGACTT ACCCCTATTT TATGCCCAAA
CTGCTAAAAC AGGCGCCGCA GGTGAGTATT AATGGCCATA CTTGGTCGCA TTCTAGTATG
GAACAGCTGC TGCGCTGTGA AATTGATATG GGCATCATCT GCCGTGAGTG GGATAAGCGC
TCTTTACTGC ACATGAACAA CTTACCGGAA GAACTTGGCG CAGCAGAGTT GATTCGTGAT
TATCCTGTAT GCCTGTTAAG ACGTGATCAC CCTGCGCTAA AAGAGCCTTG GAACATAGAC
ACTTTTCTTA AGTACCGCCA TCTGCAGGTG GCCTTTGGTG GCTTGGAGCA TTGGTTGCTC
GATGATGTGC TGCGCTTAGA TCACCTGCAG CGTGATGTAG CGGTCAACAT GACCGATTTT
AATTGCGCAA TGGATCTCTG TGAAAACAGC GATCTTATCT TGTGCGCACC ACGAAAATAC
ATTCAGCAGA TGATGGTCAA CTATGATTTG GTATGCCTCG ATGTGCCGGT GCATGTCGAG
CCCGGAGCCT ACGTGCTTGT TTGGCATAAA CACTTTAATC TGGACCCGAG TCATAGCTGG
CTGCGTAACC TGATTATCGA TGGTGTTCGT GATAATCGAA AAGACTAG
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| Protein sequence | MNTDSVCLQT LYDMTYNLRH LQRPIVKQLD FNLLRVLEVL LEEQSVTSAA TRLHLSQSAV
SKQLSKLRET FDDQLFERTA YGLKATPRAL QLAPELREVL QKLDQFTRPS TFEPAESQRR
FRMHIVETAY SLTYPYFMPK LLKQAPQVSI NGHTWSHSSM EQLLRCEIDM GIICREWDKR
SLLHMNNLPE ELGAAELIRD YPVCLLRRDH PALKEPWNID TFLKYRHLQV AFGGLEHWLL
DDVLRLDHLQ RDVAVNMTDF NCAMDLCENS DLILCAPRKY IQQMMVNYDL VCLDVPVHVE
PGAYVLVWHK HFNLDPSHSW LRNLIIDGVR DNRKD
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