Gene Spea_0277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0277 
Symbol 
ID5660677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp309273 
End bp310493 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content47% 
IMG OID641234807 
Producthypothetical protein 
Protein accessionYP_001500140 
Protein GI157960106 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein
[COG3610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATAATC AAGAGTTTTT AGAAAAGCGC CGTTTCATCA TTAGGCTCGG TAAGGCACTG 
CATAAATTTG GTACTCCGGC CTACCGCCTT GAAGCCCACT TGCAAGGTGT GTCTAACGTG
CTCGGCATTG AAGGTTATTT TTTGATTTCG CCTACTGCGA TGACTTTTGT GCTGCAACAT
GAGGAAGACC AAGAATATAA CCACGTCGCC CGAGTGAAAC CCGGTGAACT CGATTTAGGC
TCACTAGCTA GAACCGATGA GTTAGTCGAA GAGCTCATGT CTGGTCAACG CACGCTTAGT
GAGGCACTTG AACGTCTAGA AGAAATTGCC AATAAGCCTA ACCCCTACGG CACCAAATTA
ACCCTAATGG CCTTTGGCAC TTCAGCAGGT GCTTTTGCCA TGTTAATGGG CACCAGTTGG
AACGATGTGT TCTGGTCAGG AATATTAGGC TTAATGGTTT ATGGTTTAGT CTATCGCGCC
GAGCGCTCTA AACGCATGGC TGAGATGCTT GAACCTCTCG CCGCCATTTT ATGCGCTATT
GCCGCCTATG CCATTGCCCA ATTTGATCCC TCGGTGAATA TTCCCGTAGT GATCCTCTCT
GGCATTATCA TTTTCATACC CGGTTTAGCC TTGACGCTCG GCTTAGCCGA ACTGGCTGCA
CGAGATTTAA TCTCAGGTAC AGCAAGGGTC ATGGATGCCT TCATGTTGCT ATTTAAGCTC
TATTTTGGGG TGATCTTAGG CATGGCTATA GGTAAGACAC TATTTGGTGA AGTAACCTAT
CAGCCGCCAG AATCTTTACC CCAGTGGGGA ATTTGGGCGG CGGTCCCCAT TCTTTCTACA
GCGCTAGTGA TTATCTTTAA AGCGCGTCTA AAAGATTCAC CATGGGGGAT TATGGCGGGC
ATCGTCGCCT TCTTCTCAGC CATGTTAGGT GGACTCTATT TTGGCGAATC TATCGGTATT
TTCTTTGGTG CATTAGCAGT AGGCGTATAC TCCAACCTCT TCGCCCGCTG GATGAAGGCT
CCCGCCTCTA TCGCACTCTT ACAAGGTATC GTCATCTTAG TACCCGGCAG CAAAACCTAT
ATCGGCCTTA ATACCTTAAT CTTGGGTGAG ACTATCTTTA ATCAGTCGCA CTTAGGCATT
CAAATCTTCT TAATTTTCAT GTCAATTGTT GCGGGCTTAA TTTTTGCCAA TGTCGCAGTG
CCACCAAGGC GCACCCTGTA A
 
Protein sequence
MDNQEFLEKR RFIIRLGKAL HKFGTPAYRL EAHLQGVSNV LGIEGYFLIS PTAMTFVLQH 
EEDQEYNHVA RVKPGELDLG SLARTDELVE ELMSGQRTLS EALERLEEIA NKPNPYGTKL
TLMAFGTSAG AFAMLMGTSW NDVFWSGILG LMVYGLVYRA ERSKRMAEML EPLAAILCAI
AAYAIAQFDP SVNIPVVILS GIIIFIPGLA LTLGLAELAA RDLISGTARV MDAFMLLFKL
YFGVILGMAI GKTLFGEVTY QPPESLPQWG IWAAVPILST ALVIIFKARL KDSPWGIMAG
IVAFFSAMLG GLYFGESIGI FFGALAVGVY SNLFARWMKA PASIALLQGI VILVPGSKTY
IGLNTLILGE TIFNQSHLGI QIFLIFMSIV AGLIFANVAV PPRRTL