Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0277 |
Symbol | |
ID | 5660677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 309273 |
End bp | 310493 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641234807 |
Product | hypothetical protein |
Protein accession | YP_001500140 |
Protein GI | 157960106 |
COG category | [S] Function unknown |
COG ID | [COG2966] Uncharacterized conserved protein [COG3610] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATAATC AAGAGTTTTT AGAAAAGCGC CGTTTCATCA TTAGGCTCGG TAAGGCACTG CATAAATTTG GTACTCCGGC CTACCGCCTT GAAGCCCACT TGCAAGGTGT GTCTAACGTG CTCGGCATTG AAGGTTATTT TTTGATTTCG CCTACTGCGA TGACTTTTGT GCTGCAACAT GAGGAAGACC AAGAATATAA CCACGTCGCC CGAGTGAAAC CCGGTGAACT CGATTTAGGC TCACTAGCTA GAACCGATGA GTTAGTCGAA GAGCTCATGT CTGGTCAACG CACGCTTAGT GAGGCACTTG AACGTCTAGA AGAAATTGCC AATAAGCCTA ACCCCTACGG CACCAAATTA ACCCTAATGG CCTTTGGCAC TTCAGCAGGT GCTTTTGCCA TGTTAATGGG CACCAGTTGG AACGATGTGT TCTGGTCAGG AATATTAGGC TTAATGGTTT ATGGTTTAGT CTATCGCGCC GAGCGCTCTA AACGCATGGC TGAGATGCTT GAACCTCTCG CCGCCATTTT ATGCGCTATT GCCGCCTATG CCATTGCCCA ATTTGATCCC TCGGTGAATA TTCCCGTAGT GATCCTCTCT GGCATTATCA TTTTCATACC CGGTTTAGCC TTGACGCTCG GCTTAGCCGA ACTGGCTGCA CGAGATTTAA TCTCAGGTAC AGCAAGGGTC ATGGATGCCT TCATGTTGCT ATTTAAGCTC TATTTTGGGG TGATCTTAGG CATGGCTATA GGTAAGACAC TATTTGGTGA AGTAACCTAT CAGCCGCCAG AATCTTTACC CCAGTGGGGA ATTTGGGCGG CGGTCCCCAT TCTTTCTACA GCGCTAGTGA TTATCTTTAA AGCGCGTCTA AAAGATTCAC CATGGGGGAT TATGGCGGGC ATCGTCGCCT TCTTCTCAGC CATGTTAGGT GGACTCTATT TTGGCGAATC TATCGGTATT TTCTTTGGTG CATTAGCAGT AGGCGTATAC TCCAACCTCT TCGCCCGCTG GATGAAGGCT CCCGCCTCTA TCGCACTCTT ACAAGGTATC GTCATCTTAG TACCCGGCAG CAAAACCTAT ATCGGCCTTA ATACCTTAAT CTTGGGTGAG ACTATCTTTA ATCAGTCGCA CTTAGGCATT CAAATCTTCT TAATTTTCAT GTCAATTGTT GCGGGCTTAA TTTTTGCCAA TGTCGCAGTG CCACCAAGGC GCACCCTGTA A
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Protein sequence | MDNQEFLEKR RFIIRLGKAL HKFGTPAYRL EAHLQGVSNV LGIEGYFLIS PTAMTFVLQH EEDQEYNHVA RVKPGELDLG SLARTDELVE ELMSGQRTLS EALERLEEIA NKPNPYGTKL TLMAFGTSAG AFAMLMGTSW NDVFWSGILG LMVYGLVYRA ERSKRMAEML EPLAAILCAI AAYAIAQFDP SVNIPVVILS GIIIFIPGLA LTLGLAELAA RDLISGTARV MDAFMLLFKL YFGVILGMAI GKTLFGEVTY QPPESLPQWG IWAAVPILST ALVIIFKARL KDSPWGIMAG IVAFFSAMLG GLYFGESIGI FFGALAVGVY SNLFARWMKA PASIALLQGI VILVPGSKTY IGLNTLILGE TIFNQSHLGI QIFLIFMSIV AGLIFANVAV PPRRTL
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