| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0254 |
|---|
| Symbol | |
|---|
| ID | 5664669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 284069 |
|---|
| End bp | 285322 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641234784 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001500117 |
|---|
| Protein GI | 157960083 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.313885 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGTT ATACACTTGC AGCTTCATGT ATCGCCCTTG CATTATCCGC TAATGCGAAT
GCCACCCCAA TAGATGAAGA GCTAGAGGCG TTAAAAGCCC GTATCGAGCA ACTCGAGGCT
CAGCAGCTTG AATCTCAACA GCAGCAACCA GAGATGCTAG TTGTTGAAGA ACAAACACAG
AAGCCAGAGA ATACCGTCAA CTTTGGCGGC GCTGTACGGG TTAATTATTC CTATGAAGAT
TTTGATGACG ATAACGCCGA TCGCGGTGGC GACTTTGATT TTGACCTCTT CCGTATAGAC
GTTTCAGGCA ATTACCAAGA TCTTATTTTT TCGGCTCAAT ACCGCTGGTT TGAGTATATG
AATGTCATTC AGCACGCATG GATTGGCTAC AACTTTAATG AGGAGCAGCA GGGTAAAATT
GGGGTGACTC AAGTGCCCTT TGGTATTTTA ACTTACGCAT CAAACAACTA CTTCTTCAGC
TCTAACTTCT ATCTTGGGCT TGAAGACGAC TATGACATGG GCCTAAATTA CACCTATAAA
AGCACTGCCA ATCAATTTGA TTTCGCCTTC TATAAAAATG ACGAACAGGG TGGTCTCGAC
GGTTATGTCT CTGACCGCAC CGATCGTTAC GCTTATGATG TGGTAGGCAT TCGTTTAGAC
GGTGAAGATG CCTACGATGC GCCAAGCGCT GGCTATGCCG CAGGAGAAGT GAATACCTTT
AACGCTCGTT ACGCCCATAA CTTCAAATTT AGTGCTGTAG ACGTTGAATT GGGGGCATCA
ATCCAAGCCG GCCAACTAGA AATTGAAAAT GGTACCGATG GTGATAATGT CGCGGCAGCT
ATCCATGGCG TAGTGAATTA CGACCGCTGG AACGTAAAAC TGCAGATGAC TGATTACAAG
TACGACGTTG ATGGCATAGA TGTGGACCGT ATTGTGGTAG CCGCCTATCA TTTCTATGAC
TCTATACCAG CTGAAGCCAC CACATACATT GCCAACCTAG CCTACAGCCT TCCTGTTGAT
ATCGGGCCAA TATCAAACCT CACCTTCTAT AACGACTATT CTCTGGTAAC CGATAAGCCT
GCAGCCATGG AAGACACCTT TATGAACGTA ACGGGTATGG CGGTTTCCGC CGGTGGACTC
TACACCTATT TTGATTTTGT AGTGGCAGAA AACCAGCCCT TTATTGGCGG AACCATGGTC
GGAGATGGCG ACACCAACAA ACGCTTTAAC ATCAACTTTG GTTATTATTT CTAG
|
|---|
| Protein sequence | MIRYTLAASC IALALSANAN ATPIDEELEA LKARIEQLEA QQLESQQQQP EMLVVEEQTQ
KPENTVNFGG AVRVNYSYED FDDDNADRGG DFDFDLFRID VSGNYQDLIF SAQYRWFEYM
NVIQHAWIGY NFNEEQQGKI GVTQVPFGIL TYASNNYFFS SNFYLGLEDD YDMGLNYTYK
STANQFDFAF YKNDEQGGLD GYVSDRTDRY AYDVVGIRLD GEDAYDAPSA GYAAGEVNTF
NARYAHNFKF SAVDVELGAS IQAGQLEIEN GTDGDNVAAA IHGVVNYDRW NVKLQMTDYK
YDVDGIDVDR IVVAAYHFYD SIPAEATTYI ANLAYSLPVD IGPISNLTFY NDYSLVTDKP
AAMEDTFMNV TGMAVSAGGL YTYFDFVVAE NQPFIGGTMV GDGDTNKRFN INFGYYF
|
|---|
| |