| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0247 |
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| Symbol | |
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| ID | 5660647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 276830 |
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| End bp | 277699 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234776 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001500110 |
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| Protein GI | 157960076 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAAC TGCCTCCGCT TAGGGCGTTG CAAGTATTCG AAGCCGCTGC CAGACAGTCA
CATTTCTCAC GCGCAGCCAC AGAGCTTTGC ATTACCCAAA GTGCCGTATC TCATCAAGTA
AAACAGCTTG AAGAGCACTA TGGCGAGCGG CTATTTAAGC GTGAGGGACG CCAGCTACGA
CTGACTAGCA AAGGCGAGTT GCTATATAAA GAGTTAGAAC GGATCTTTAA TGAACTGAGT
GACTTAAGCA TGCAAATAAG TGGCGACAGT AATGATCAGC TTCGCCTTGC CGTTTACAGC
TCATTTGCGA TCAAATGGCT CATTCCAAGA CTCAGCGACT TTAGACGCCA ACATCCACAG
ATAAAGATCC GCCTCGATAT GATTGCTGAT GATCCCGAGT TAAGCGACAG CGTGGCAGAT
ATGTTTATCA CCGGCCAAAG CGGCCAATTA GGTTACCATC ATCACTTGTT GCATAAAGAG
CGCTTAATTC CGGTTATTAG CCCAAGCTTG ATGGATTCAG ATAGCTTAGC ACTGGACGAA
TTAGCTAAAC ACCCATTGCT AACTGTTGAC GAAGGTCCAC TCGGATTAGA TTGGGACAGA
TGGTTTGTGG CAAATAATTT AGCTCTGCCT GCTGAGCAAC AACAGCATAT TTTTAGTCAT
GTGTTAATGG CGATTGAGGC AGCTATTGCT GGTCAAGGAA TTGCCCTCGC ATCGGACTTT
ATGGTGCAAG CCGACATCGA AAGGGGCTTG TTAGTTGAGT TGGATTTACC CGATATCCTG
ACTGGATTTG AATTCTACTT CAGTTGTAAA CAGCGTCGAC TCAAAGAGCC TGCCATTGCC
GCCTTTGTGA CTTGGTTAAG CCTACAGTAG
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| Protein sequence | MRKLPPLRAL QVFEAAARQS HFSRAATELC ITQSAVSHQV KQLEEHYGER LFKREGRQLR
LTSKGELLYK ELERIFNELS DLSMQISGDS NDQLRLAVYS SFAIKWLIPR LSDFRRQHPQ
IKIRLDMIAD DPELSDSVAD MFITGQSGQL GYHHHLLHKE RLIPVISPSL MDSDSLALDE
LAKHPLLTVD EGPLGLDWDR WFVANNLALP AEQQQHIFSH VLMAIEAAIA GQGIALASDF
MVQADIERGL LVELDLPDIL TGFEFYFSCK QRRLKEPAIA AFVTWLSLQ
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