| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0233 |
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| Symbol | |
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| ID | 5660633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 264383 |
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| End bp | 265462 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641234762 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_001500096 |
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| Protein GI | 157960062 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCTA ATTTATGGAA GCGTCAGGCC CCGCAGATGG TTGGGATCGA TGTGGGATCC
CATGAAGTAA AAGCTATTCT GTTGAGCAAG ACTGCTGATG GGTACAAAAT ATTAAGCCAT
GCAGCCGTTC CTTTGAAAAA AGGAGCCGTT AATGATCATG AGATCCGTGA TAGCGAGGCC
GTCGTTGACG CGTTAAAACA GATAAAGCGC GTTTTACCAA AGTCTACTAA GTATGCCGCT
GTTGCTGTTT CTGGTTCAGC AGTCATGACC AAAGTTATTT TTATGGATTC GGCATTAAGT
GAAGAAGAGA TGGAAGCTCA AATTGAAATT GAAGCCGACA ATCTTATTCC TTATTCGCTT
GATGAAGTGA ATATCGATTT CGAAACCTTA AGCACTAATC GTACCGATCC CTCTAAAGTC
GATGTGCTAT TAAGCGCTTG TCGCTCTGAA AATATCGATA GTTTAAGTGA CTCACTCGAT
GCGGTGAATC TAGAAGCTAA AGTGGTTGAT GTTGAAGGCT ATGCGCTAGG GCGATCTTTT
GACATGATAG CTGGTCAACT GCCTGATGGT GTTAGCGATA AAGTCGTCGC GCTGGTGGAT
ATTGGTGCCA ACATCACCAC ATTCTCTGTT GTTGAGCACG GTGAAACCAC ATTTGTCCGT
GAGCAAGCCT TTGGCGGTGA GCAGTTTACC CAGTCAATCT TATCTTTCTA TGGTATGACC
TATGAGCAGG CTGAAAAAGC TAAGCTTGAA GGTGAACTGC CACGTAACTA TGTATTTGAG
GTCTTATCGC CATTTCAGAC TCAGTTATTA CAACAAATTA AGCGCACCTT ACAAATTTAC
TGCACCTCTA GTGGTCGAGA TAAAGTAGAC CATATTGTTT TGTGTGGTGG TACATCGAAG
CTTGAGGGTA TGACTGAGCT AATGGTTAAT GAGTTAGGCG TGCATACGAT TATTGCCGAC
CCATTCCAAG GATGCTTACA TGCCGATGAG GCTATAAAGA ACCATCTACA GCCTCAAATT
AGCAAGTATA TGTTGGCATG TGGCTTAGCG CTAAGGAGCT ATTCAGAATG GCGAACATAA
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| Protein sequence | MLSNLWKRQA PQMVGIDVGS HEVKAILLSK TADGYKILSH AAVPLKKGAV NDHEIRDSEA
VVDALKQIKR VLPKSTKYAA VAVSGSAVMT KVIFMDSALS EEEMEAQIEI EADNLIPYSL
DEVNIDFETL STNRTDPSKV DVLLSACRSE NIDSLSDSLD AVNLEAKVVD VEGYALGRSF
DMIAGQLPDG VSDKVVALVD IGANITTFSV VEHGETTFVR EQAFGGEQFT QSILSFYGMT
YEQAEKAKLE GELPRNYVFE VLSPFQTQLL QQIKRTLQIY CTSSGRDKVD HIVLCGGTSK
LEGMTELMVN ELGVHTIIAD PFQGCLHADE AIKNHLQPQI SKYMLACGLA LRSYSEWRT
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