Gene Spea_0134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0134 
Symbol 
ID5660535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp149524 
End bp150183 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content45% 
IMG OID641234647 
Productsignal peptidase I 
Protein accessionYP_001499998 
Protein GI157959964 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG TGAAACAGCT TTGGAAAGAA AATCGTCAGC TTGTGCTATT CATTGTTTTA 
ATGTCTGTTT GCAGAAGTGC TATCGCCGAC TGGTACACAG TACCGACAGG CTCTATGCAG 
CCTACGATTA AAGAGGGCGA CCGCATTGTG GTCGATAAAC TGGCCTACGA CTTACATGTG 
CCCTTTACTC AAATATCATT AGCCACAACT GGCGAGCCTG AACGCGGTGA AATAGTGGTG 
TTTGAATCAA AAGCCGCTGA TAAACGTTTA ATCAAGCGGG TTATTGGCTT ACCTGGCGAT 
ACCATTAGCT TAAGCAATGA AGTGCTATTT ATTAATGGCA AGGCGTTGGC TTACTCGGTG 
GTATCTAGCA GTGCTCAAGA ATTAATTGCT AAGGAAGATC TCAATGGCTT ATCCCATAGC 
ATCCGTATTG AAAAGCAGGC CAGTGATCAG TTAAGTAGCT TCGAAACGGT AATTGTGCCC 
GAAGGGCATT ATATGGTGAT GGGCGATAAC CGCCGTAACA GCGCTGACTC ACGGGTATAT 
GGCTTTGTCC CTCGGGATGA AATCAAAGGT AAAGCAACCC AAGTTGCTTT CTCACTGGAT 
TATGAAGACA ACTACATACC CCGCCAAGAT CGGTTTTTCA CTAGCCTTTA TGGCGGGTAA
 
Protein sequence
MNKVKQLWKE NRQLVLFIVL MSVCRSAIAD WYTVPTGSMQ PTIKEGDRIV VDKLAYDLHV 
PFTQISLATT GEPERGEIVV FESKAADKRL IKRVIGLPGD TISLSNEVLF INGKALAYSV 
VSSSAQELIA KEDLNGLSHS IRIEKQASDQ LSSFETVIVP EGHYMVMGDN RRNSADSRVY 
GFVPRDEIKG KATQVAFSLD YEDNYIPRQD RFFTSLYGG