| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0116 |
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| Symbol | |
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| ID | 5660517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 130187 |
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| End bp | 130930 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641234629 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001499980 |
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| Protein GI | 157959946 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3306] Glycosyltransferase involved in LPS biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGATGTT TCGTTATTAG CTTGGTTACA GAGGATCGGA GACGCTCTCA TATTAGTCAT
GAGTTTTCTT CTCAAGCTAT TCCTTTTGAG TTTTTTGATG CAATTACTCC CGTTCAAAAT
GAAGCTGAAG CCAATCGTTT ACAGATCCTA ACTCAAGGTA CAACCCTGAG TAAGGGTGAG
ACTTCTTGCT TGTTAAGTCA TGTCGCCATT CTGCAAAAAA TCGTCGATGA ATCGATCCCT
TATGCTGCGA TTTTCGAAGA TGATATTCAT TTGAGTAAGG ATGCTTATCA CTATCTCTGT
TCTGAAAACT GGATCCCTGA CTCGGTAGAA CTGGTTAAAC TCGAAATGTT TAATCATATT
GCCAAAGGGC AGTTTTTGGG GACGCATAAG CTAGAGTCTG GTAAAGAGCT TTTTAGGCTG
AAGGGGCGCC ACTTAGGAGC TGCTGGTTAT ATTGTAACGT GCAACATGGC GAGTCAGTTA
TTAAATGAAG TTCGTCGATG CGAACCTGTT GAAGCGATAG ATAAGATTAT CTTTGAAGAA
TTGATCACTT CAAATAAAGT GGACGTGTAT CAGTTGCAGC CTGCGATTTG TGCGCAAGAT
GACATTATCG ACAGGAAAAA TAGTGTTCTC CATAGTAGTT TGAATGCCGA ACGAATACTG
CCAGCAAAGA AAAAGTTGAG CTTAGCGATG AAAGCTAAGC GTGAACTGGA GCGTATTTTT
AGCCGTCGCA TCCAATTTAA GTAA
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| Protein sequence | MRCFVISLVT EDRRRSHISH EFSSQAIPFE FFDAITPVQN EAEANRLQIL TQGTTLSKGE
TSCLLSHVAI LQKIVDESIP YAAIFEDDIH LSKDAYHYLC SENWIPDSVE LVKLEMFNHI
AKGQFLGTHK LESGKELFRL KGRHLGAAGY IVTCNMASQL LNEVRRCEPV EAIDKIIFEE
LITSNKVDVY QLQPAICAQD DIIDRKNSVL HSSLNAERIL PAKKKLSLAM KAKRELERIF
SRRIQFK
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