| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4709 |
|---|
| Symbol | |
|---|
| ID | 5605433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 5204067 |
|---|
| End bp | 5204528 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640940275 |
|---|
| Product | histidine triad (HIT) protein |
|---|
| Protein accession | YP_001480930 |
|---|
| Protein GI | 157372941 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGCA TATTTTGTGA AATGGTGGCA GGCCGGGTGC CGTGCCATAA AATTTGGGAG
GACGACGGCC ACATGGCGTT CCTGTCCATC TATCCGAATA CCGAGGGTTT CAGCGTGGTG
ATCCCCAAGG CGCACTACGA GAGTTACGCT TTTGCCGTAG CGGACGACGT GCTGAGCGAA
CTGATGCTGG CGACCAAACG GGTGGCGCAG TTGCTCGACC GGGCGTTTGA CGATGTGGGC
CGCTGCGGCA TGGTGTTCGA AGGCTTTGGC GTCGATCACC TGCACGCCAA ACTGATCCCG
ATGCACGGCA CCGCCGCACT GGAACAATGG CAGCCGATTG AGTCGAAATC GACGAAGTTC
TTCGACCGCT ACGAAGGTTA CCTGTCTTCC CACGATGCTG CACGTGCCGA CGACGATCGT
CTGGCCGCCC TGGCGGCGCA GATCCGTCAG AGTGCGGTTT AA
|
|---|
| Protein sequence | MSCIFCEMVA GRVPCHKIWE DDGHMAFLSI YPNTEGFSVV IPKAHYESYA FAVADDVLSE
LMLATKRVAQ LLDRAFDDVG RCGMVFEGFG VDHLHAKLIP MHGTAALEQW QPIESKSTKF
FDRYEGYLSS HDAARADDDR LAALAAQIRQ SAV
|
|---|
| |