Gene Spro_4677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4677 
Symbol 
ID5607221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5168126 
End bp5168665 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content56% 
IMG OID640940243 
Productfimbrial protein 
Protein accessionYP_001480898 
Protein GI157372909 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTAC GCGCTTTAGC GATGCTCAGT TGCACGCCCT TTTGGTTTAC AACATTGCCG 
ACTCTGGCGG ATACCGAGTT GGTCGGGTCT CCGCTGCAGT TCCACGGCAC CGTGGTGAGC
CGGCCGTGCA ACATTGAGCC GCAATCGGCC GATCAGGTGG TGGAAATGGA CACGGTGATC
GTCAAAACCC TGTACCGCTA TGGGCATAGC AACCCGGTAC CGTTCAACAT CAAGCTGACC
GACTGTAAAA CGTCGGTATT CAAATCCGTC AACGTTACCT TCAGCGGTAC CGAAGACAGT
GAACTGCCGG GCAAGCTGGC GATCAATAAC GGCACCAACG GCGCCGCTAT CGCCCTGTTT
GACAGCAAGG GGGCCGATAT TGATTTGAAC CAGGCCACCA GCGCGGTGGC ATTGCAGGAT
GGCGCCAACA TTCTGAACTT TACCGCCTAT GTGCAGGGCC ACCCCAGCGC GATACAGAAT
AAAACCATTA CCGAGGGTGA GTTCAGCTCG GTGGCCAATT TCGTGCTGGC CTATCAATAA
 
Protein sequence
MRLRALAMLS CTPFWFTTLP TLADTELVGS PLQFHGTVVS RPCNIEPQSA DQVVEMDTVI 
VKTLYRYGHS NPVPFNIKLT DCKTSVFKSV NVTFSGTEDS ELPGKLAINN GTNGAAIALF
DSKGADIDLN QATSAVALQD GANILNFTAY VQGHPSAIQN KTITEGEFSS VANFVLAYQ