Gene Spro_4672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4672 
Symbol 
ID5606801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5162536 
End bp5163087 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content59% 
IMG OID640940238 
Productfimbrial protein 
Protein accessionYP_001480893 
Protein GI157372904 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGC GGATTTGGGG CGTAGTGCTT ATCGCGCTCA GCGTTTGCAG CGCCGAAGCG 
ACGGCAAAAA ATCAGGGCCA CGGCACGCTC AACCTGGGCG GCGAGATCGT CGAAACCCCC
TGTGGGATTG CCAGCGAAAG CCTGGACCAG ACCGTTGATT TCGGGCTGAT ATCCATGACT
GATGCCGCGT TGGATACGCA GCCGGTGCTG ATTGGCAGTC GCCGCAACTT TGAAATCAAG
CTGGTGAATT GCGAATTAGC CAGCCAGGTA AAACCCGACT TTATCTACCG CGCAGCCACC
GTCACCTTCG ACGGCACGGC TGACAGCCGG GATCCCGAGT TATTGGCCGT TTATGGCGAA
GCGCAAGGCG TGGCCATTGA GCTGCTGACC GCTGCCGGTA TCCCGATCCC GCTGGGTAGC
ACCACGGCGG ATTATCAGAT TGTCGCCGGC GACAATACGC TGCGCTTTAG CGCTCAGCTA
CGTATTCACC CTGACAGGGC CCGAGCCGGC GGATTCAGCT CTCTGGCGAA ATTCACCCTG
TCTTATCTGT AA
 
Protein sequence
MTKRIWGVVL IALSVCSAEA TAKNQGHGTL NLGGEIVETP CGIASESLDQ TVDFGLISMT 
DAALDTQPVL IGSRRNFEIK LVNCELASQV KPDFIYRAAT VTFDGTADSR DPELLAVYGE
AQGVAIELLT AAGIPIPLGS TTADYQIVAG DNTLRFSAQL RIHPDRARAG GFSSLAKFTL
SYL