Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4610 |
Symbol | |
ID | 5605158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 5083908 |
End bp | 5084750 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640940176 |
Product | hypothetical protein |
Protein accession | YP_001480831 |
Protein GI | 157372842 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00772577 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCACTC AAGCATGGCA GGTGGGGCTG GATATACAAA GTCACTGCGT TCGTGCCCTG GCGGCACAGC GCCGTCGCAA TGGCTGGCAA CTGCGTCACT GGTGGCAACA AAGGTTGCCG CAACCGGTGC TGCGTGAGGG CTGTCTGGAG CAGAGCGACG CGCTGATCCA GGCGTTGCGC CAATGGCGGG TTCAGTTACC AAGACATATT TCCTTACGCA TTGCTCTGCC CGCGCAGCGG GTTTTACAGC ACAGGTTGCC ACTGCCGGAC GCCAGGCTGA AAGAGCCTGC GCGCGGTGAC TACATCACCA GCCAGGGGCT GAAAAAGTTT CCTCTGGATA GCCAAACATT GGCGCTGGAC TACCGCCAAT CCCTGCCCGA ACACGCGACT CTGCTGCTGA CCGCCGCCCG TCAGCAAGAG CTGCAACAGT GGCTGAACTG TCTGCGTCAG GCCAATTTAC AGCCGCAGGT GGTTGATATT GCCCCATGTG CGCTACGCGT GATGGCGGCG GCCGCAGGCG TGTCGGGCGA AGCCGGTTTG CTGCACCGCC TCGATGAAGA ATGGTTATGG GTGACCGCAC ACCGAACGGA GTTTGCCTAT GGCCAGGTAT CGATTCGGGA AGCGGACGGG GCAAATCAGG TGTTGGCCGC AATGCGTACC GCCTGCCCAT CGCTCGGCGA ACATCAGATT TACTATAGCA GCGTGATGGA TGAGCAGCCT CCGTCTGGGA GCTTGCCGTG GTCACCGCTC AGCGCTTTCA GCCAGCTGCG TCCTCCGTTA CCCCCATTGC CGGCGGCATT TGCCCTGGCC GGCGGGTTGG CGCTGCGCGC TGAGGACAAC TGA
|
Protein sequence | MITQAWQVGL DIQSHCVRAL AAQRRRNGWQ LRHWWQQRLP QPVLREGCLE QSDALIQALR QWRVQLPRHI SLRIALPAQR VLQHRLPLPD ARLKEPARGD YITSQGLKKF PLDSQTLALD YRQSLPEHAT LLLTAARQQE LQQWLNCLRQ ANLQPQVVDI APCALRVMAA AAGVSGEAGL LHRLDEEWLW VTAHRTEFAY GQVSIREADG ANQVLAAMRT ACPSLGEHQI YYSSVMDEQP PSGSLPWSPL SAFSQLRPPL PPLPAAFALA GGLALRAEDN
|
| |