Gene Spro_4610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4610 
Symbol 
ID5605158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5083908 
End bp5084750 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content61% 
IMG OID640940176 
Producthypothetical protein 
Protein accessionYP_001480831 
Protein GI157372842 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4972] Tfp pilus assembly protein, ATPase PilM 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00772577 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTC AAGCATGGCA GGTGGGGCTG GATATACAAA GTCACTGCGT TCGTGCCCTG 
GCGGCACAGC GCCGTCGCAA TGGCTGGCAA CTGCGTCACT GGTGGCAACA AAGGTTGCCG
CAACCGGTGC TGCGTGAGGG CTGTCTGGAG CAGAGCGACG CGCTGATCCA GGCGTTGCGC
CAATGGCGGG TTCAGTTACC AAGACATATT TCCTTACGCA TTGCTCTGCC CGCGCAGCGG
GTTTTACAGC ACAGGTTGCC ACTGCCGGAC GCCAGGCTGA AAGAGCCTGC GCGCGGTGAC
TACATCACCA GCCAGGGGCT GAAAAAGTTT CCTCTGGATA GCCAAACATT GGCGCTGGAC
TACCGCCAAT CCCTGCCCGA ACACGCGACT CTGCTGCTGA CCGCCGCCCG TCAGCAAGAG
CTGCAACAGT GGCTGAACTG TCTGCGTCAG GCCAATTTAC AGCCGCAGGT GGTTGATATT
GCCCCATGTG CGCTACGCGT GATGGCGGCG GCCGCAGGCG TGTCGGGCGA AGCCGGTTTG
CTGCACCGCC TCGATGAAGA ATGGTTATGG GTGACCGCAC ACCGAACGGA GTTTGCCTAT
GGCCAGGTAT CGATTCGGGA AGCGGACGGG GCAAATCAGG TGTTGGCCGC AATGCGTACC
GCCTGCCCAT CGCTCGGCGA ACATCAGATT TACTATAGCA GCGTGATGGA TGAGCAGCCT
CCGTCTGGGA GCTTGCCGTG GTCACCGCTC AGCGCTTTCA GCCAGCTGCG TCCTCCGTTA
CCCCCATTGC CGGCGGCATT TGCCCTGGCC GGCGGGTTGG CGCTGCGCGC TGAGGACAAC
TGA
 
Protein sequence
MITQAWQVGL DIQSHCVRAL AAQRRRNGWQ LRHWWQQRLP QPVLREGCLE QSDALIQALR 
QWRVQLPRHI SLRIALPAQR VLQHRLPLPD ARLKEPARGD YITSQGLKKF PLDSQTLALD
YRQSLPEHAT LLLTAARQQE LQQWLNCLRQ ANLQPQVVDI APCALRVMAA AAGVSGEAGL
LHRLDEEWLW VTAHRTEFAY GQVSIREADG ANQVLAAMRT ACPSLGEHQI YYSSVMDEQP
PSGSLPWSPL SAFSQLRPPL PPLPAAFALA GGLALRAEDN