Gene Spro_4563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4563 
SymboltauD 
ID5602663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp5038104 
End bp5038952 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content56% 
IMG OID640940129 
Producttaurine dioxygenase 
Protein accessionYP_001480784 
Protein GI157372795 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.737071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAC GTTTAAATAT CACCCCATTG GGGCCTTATA TCGGTGCGCT GGTGGAAAAC 
GTTAATCTGG CACGCCCCCT GGGTGATGGC CAATTCGAAC AGCTCTACCA TGCGTTGCTG
AAACATCAGG TGCTGTTTCT GCGTAATCAG CCGATCACCC CGTTGCAACA GCGGAATTTG
GCCGGTCGCT TCGGCGACCT GCATATCCAT CCGGTCTATC CGCAAGCCGC CGATGTGAAA
GAGATTATCG TGCTGGATAC CCATGACCAT AATCCGCCGG ACAATGATAA CTGGCATACC
GACGTGACCT TTATCGAGAA TCCGCCGCTG GGGGCGATTC TGGCGGCGAA AACCCTGCCT
TCCACCGGTG GCGATACGCT ATGGGCCAGT GGTATTGCGG CCTATGAAGC GCTGTCTGAG
CCGTTCAGGC AATTGCTGGC CGGGCTGAAG GCGGAGCATG ATTTCACCAA GTCATTCCCG
GAACACAAGC ATCGCGGCAG CGAAGAAGAG CGCCAGCGCT GGCAGGTAGC GGTACAGAAA
AATCCGCCGT TGCTGCATCC GGTAGTGCGC ACGCATCCGG TCAGCGGCCG GCAGGCCCTG
TTCGTCAATG AAGGTTTTAC GACGCGGATT GTTGATCTGG CACCGAAGGA AAGCGACGCG
CTGCTGAACT TTCTGTTCGC CCACATCACC AAGCCGGAGT TTCAGGTGCG TTGGCGTTGG
CAGGAAAATG ACATTGCCAT CTGGGATAAC CGCGTGACGC AGCATTACGC CAACGCGGAT
TATCTGCCGC AGCGGCGCAT TATGCACCGC GCGACCATTC TGGGGGACAA GCCTTTTTAT
AAGGCTTAA
 
Protein sequence
MNERLNITPL GPYIGALVEN VNLARPLGDG QFEQLYHALL KHQVLFLRNQ PITPLQQRNL 
AGRFGDLHIH PVYPQAADVK EIIVLDTHDH NPPDNDNWHT DVTFIENPPL GAILAAKTLP
STGGDTLWAS GIAAYEALSE PFRQLLAGLK AEHDFTKSFP EHKHRGSEEE RQRWQVAVQK
NPPLLHPVVR THPVSGRQAL FVNEGFTTRI VDLAPKESDA LLNFLFAHIT KPEFQVRWRW
QENDIAIWDN RVTQHYANAD YLPQRRIMHR ATILGDKPFY KA