| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4498 |
|---|
| Symbol | |
|---|
| ID | 5607454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | + |
|---|
| Start bp | 4983336 |
|---|
| End bp | 4984673 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640940060 |
|---|
| Product | gluconate transporter |
|---|
| Protein accession | YP_001480720 |
|---|
| Protein GI | 157372731 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2610] H+/gluconate symporter and related permeases |
|---|
| TIGRFAM ID | [TIGR00791] gluconate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0243514 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATACTG TAACGCTGGT CGGTACCGCA GTCGGCTCGG TTCTCTTACT GCTGTTTCTG
GTGATGAAGG CGCGTATGCA CGCCTTTGTC GCATTAATGC TGGTGTCTAT CGCTGCCGGG
ATCTTCTCCG GCATGCCGCT GGATCGCATT GCCGATACCA TGCAAAAAGG CATGGGCGAC
ACCTTGGGCT TCCTGGCCAT CGTGGTGGCG CTGGGGGCGA TGTTTGGCAA AATATTGCAT
GAAGTCGGCG CGCTGGACCA AATTGCGGCA CATTTGCTGA AACGTTTCGG CCAAAGCAAG
GCCCATTACG CACTCGGCAT TGCCGGTTTG ATCTGTGCCT TGCCGCTGTT CTTTGACGTG
GCCGTGGTGC TGCTGATCGG CATCGTGTTT GCCGTGGCGC GCCGCACCGA CGGCAACATC
GTTAAGCTGG CCATTCCGCT GTTTGCCGGT GTCGCCGCCG CCGCGTCGTT CTTGCTGCCG
GGGCCGGTAC CGATGCTGCT GGCTTCACAA ATGAAGGCCG ACTTCGGCTG GATGATTGCC
ATCGGTCTGG TCGCCGCGGT CCTCGGCATG CTGATTGCCG GCCCGTTGTA CGGCAGCTTT
ATCAGCCGCT ACGTTAACTG GTCAATGCCG GCGGATGAAA ACGAACCGAC GCTGAACACC
GCCAAACTGC CGTCATTTGG CCTTAGTCTG GCGCTGGTAC TCTGCCCACT GGTGCTGGTC
GGCATGAAAA CCATTGGCGC CCGCCTGGTC ACGCCTGGCT CGCAGTTACA ACAATGGCTG
GAGTTTATCG GCCACCCGTT TATCGCCATT TTAGTCGCCT GTTTGATCGT GATTTATGGA
CTGGCGAAAC CACGCGGCAT GACCAACGAA CAAACGCTGG CCATTTGCTC TGCGGCAGTC
CAGCCCGCCG GGATCATTTT GCTGATGACC GGGGCCGGTG GCGTCTTCAA ACAGATTTTG
GTGGATTCCG GCGTCGGCCC AGCCCTGGGG GACGCCATGA TCGGTACCGG TCTGCCGATC
GCCGTCGCGG CCTTTGTGCT GTCCGCCATG GTACGAGTGA TTCAGGGATC TGCCACCGTG
GCCTGTCTGA CCACCGTCGG CCTGGTGTTA CCGGTGACCA GCCAACTGGG GCTTGGCGGC
GGACAACTGG CCGCGCTGGC TATCTGTATT GCCGGTGGAT CTATCGTACT CAGTCACGTC
AACGACGCCG GTTTCTGGCT GTTCGGCAAA TTTACCGGTG CCAATGAGCT GCAAACGCTG
AAAACCTGGA CTGTGATGGA AACCATTCTG GGTAGCGTGG GCGGGATTAT CGGCATGATT
GCTTTCACCC TGTTTTAA
|
|---|
| Protein sequence | MNTVTLVGTA VGSVLLLLFL VMKARMHAFV ALMLVSIAAG IFSGMPLDRI ADTMQKGMGD
TLGFLAIVVA LGAMFGKILH EVGALDQIAA HLLKRFGQSK AHYALGIAGL ICALPLFFDV
AVVLLIGIVF AVARRTDGNI VKLAIPLFAG VAAAASFLLP GPVPMLLASQ MKADFGWMIA
IGLVAAVLGM LIAGPLYGSF ISRYVNWSMP ADENEPTLNT AKLPSFGLSL ALVLCPLVLV
GMKTIGARLV TPGSQLQQWL EFIGHPFIAI LVACLIVIYG LAKPRGMTNE QTLAICSAAV
QPAGIILLMT GAGGVFKQIL VDSGVGPALG DAMIGTGLPI AVAAFVLSAM VRVIQGSATV
ACLTTVGLVL PVTSQLGLGG GQLAALAICI AGGSIVLSHV NDAGFWLFGK FTGANELQTL
KTWTVMETIL GSVGGIIGMI AFTLF
|
|---|
| |