Gene Spro_4447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4447 
Symbol 
ID5604264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4920241 
End bp4921008 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content54% 
IMG OID640940009 
Productarogenate dehydratase 
Protein accessionYP_001480669 
Protein GI157372680 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.393788 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TATTACCTCT CGCACTGCTG GTTGCCGCCG GGAGCGCCAG CGCTCAATCG 
CACCTGGATA AGGTGATCCA GCAGGGCACA CTGGAAGTGT GCACCACCGG CGATTACAAG
CCTTATACCT TCCTGAAAGA AGACGGCAGC TATGAAGGCA TTGATATCGA TATGGCGGAA
TCGCTGGCCA AAAGCCTGGG CGCCAAAGTG AAATGGGTAA AAACCAGTTG GAAAACCCTG
ACGCCGGACT TCGTCGCCGG TAAATGCGAC ATCGCCATGG GCGGCATCTC CGTCACGCTG
CAGCGTCAAA GGCAGGTATT TTTCGCCGAC ATGCTGGATA CCGACGGCAA GATCCCATTG
GTACGCTGCA CCGACGTGAA GAAATACCGC ACCATCGACC AGATCAACAA ACCGTCGGTG
CGTCTGTTGG AGCCGGCGGG CGGTACCAAC GAAGCCTTCG TGCACGCCTA TCTGCCCAAG
GCCAAACTGA CGCTGACCCA TGATAACGTG GGGATTTTCC AGCAGTTGGT CGACAAGAAA
GCCGATGTCA TGATCACCGA CGCCTCCGAG GCGCTGTATC AGCAAAAACG TTTTCCGAAA
CTGTGCGCGG TGAATCCCAA AAAACCGATG CAGTACGGCG AGAAGGCCTA CATGCTGCCG
CGTGATGATT TAAGCTGGAA ATTGTATGTG GATCAGTGGC TGCACCTGTC CAAAGCGACC
GGCGAGTATC AGAGCATTAT CGATCAATGG CTGGCGGTAA AGAAATAA
 
Protein sequence
MKKLLPLALL VAAGSASAQS HLDKVIQQGT LEVCTTGDYK PYTFLKEDGS YEGIDIDMAE 
SLAKSLGAKV KWVKTSWKTL TPDFVAGKCD IAMGGISVTL QRQRQVFFAD MLDTDGKIPL
VRCTDVKKYR TIDQINKPSV RLLEPAGGTN EAFVHAYLPK AKLTLTHDNV GIFQQLVDKK
ADVMITDASE ALYQQKRFPK LCAVNPKKPM QYGEKAYMLP RDDLSWKLYV DQWLHLSKAT
GEYQSIIDQW LAVKK