Gene Spro_4376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4376 
Symbol 
ID5603926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4844836 
End bp4845975 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content59% 
IMG OID640939938 
Productdihydroorotase 
Protein accessionYP_001480598 
Protein GI157372609 
COG category[R] General function prediction only 
COG ID[COG3964] Predicted amidohydrolase 
TIGRFAM ID[TIGR03583] probable amidohydrolase EF_0837/AHA_3915 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.430681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.791891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGACT TAGTAATCAG ACGCGCCAGA CTGGCGGATG ACCGACTGGT CGATTTGGCG 
GTTCTGGACG GCAAGATTGC CGCGGTCGGG CAACTGGCTG AAGACGTTCG CGCTCATCGG
CAATGGGATC TGGCGGGTAA TCACCACCTG AGCGCCGGCT GGATTGACTC CCACGTGCAT
TGTTACCCCT CTTCGCCGAT TTACCATGAC GAGCCGGATT TGGTTGGCAC CGCCTGTGGC
GTCACCACGG TGGTCGATGC CGGTAGCACC GGCACTGACG ATGTCGATAC GTTTTATGCA
TTGACGCGCC GTGCCAAAAC CAACGTTTTT GCTTTCCTGA ATATTTCGCG TATCGGTCTG
CTGCGACAGA ATGAACTGGC AGACCTGACC GATATCGACA AGCAGAAAGT CAGCCAGGCG
ATCGACAAAC ATGCCGGTTT TGTCATCGGT ATCAAGGCGC GCATGAGCAG CAGCGTGGTC
GGCCAGAACG GCACCCGGCC GCTGGTGCTC GCCAAAGAGA TCCAGCAGGA AAATAACCTG
TTGCCGCTGA TGGTGCATAT CGGCAATAAC CCGCCGGATC TCGATGAGAT CGCCGATCTG
CTGACCCGTG GCGATATCAT CACCCACTGC TATAACGGCA AGCCAAACCG CATCCTGACC
CCGGCCGGCA CGCTGCGCGA GTCTATCCAG CGTGCATTGC AGCGCGGTGT GTTGCTCGAC
GTTGGCCACG GTACCGCCAG CTTCAGCTTT GAGGTCGCCC GGCAGGCGAT AGCCTTGGGC
ATTTTGCCAC ATACCATCAG TTCCGATATT TACTGCCGTA ACCGCATGGC CGGGCCGGTA
CACAGCCTGG CGACGGTGAT GTCCAAATTC TTCGGCATCG GGCTGTCGCT GCCGCAGGTG
ATTGCCTGCG TGACTGAGAA TGCCGCGTCG GCCCTACGTC TGGTCAACAA GGGCCGGCTC
GAAGTGGGTT GCGACGCCGA TTTCACCCTG TTTGATCTCC GCCAGGGGCC GCAGGTGTTT
GCCGATTCAG AAGGGCAATC GGCAGCCGGC CAACAGTTGC TGGTTCCGCT GGCCGCGGTG
GTGGCCGGGG AAATCTTATT AACCGATGAA GGGAAAGCCG CTCATGTCTT CGATTTATGA
 
Protein sequence
MYDLVIRRAR LADDRLVDLA VLDGKIAAVG QLAEDVRAHR QWDLAGNHHL SAGWIDSHVH 
CYPSSPIYHD EPDLVGTACG VTTVVDAGST GTDDVDTFYA LTRRAKTNVF AFLNISRIGL
LRQNELADLT DIDKQKVSQA IDKHAGFVIG IKARMSSSVV GQNGTRPLVL AKEIQQENNL
LPLMVHIGNN PPDLDEIADL LTRGDIITHC YNGKPNRILT PAGTLRESIQ RALQRGVLLD
VGHGTASFSF EVARQAIALG ILPHTISSDI YCRNRMAGPV HSLATVMSKF FGIGLSLPQV
IACVTENAAS ALRLVNKGRL EVGCDADFTL FDLRQGPQVF ADSEGQSAAG QQLLVPLAAV
VAGEILLTDE GKAAHVFDL