Gene Spro_4243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4243 
Symbol 
ID5603021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4706357 
End bp4707451 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content59% 
IMG OID640939803 
Productgeneral secretion pathway L 
Protein accessionYP_001480465 
Protein GI157372476 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3297] Type II secretory pathway, component PulL 
TIGRFAM ID[TIGR01709] general secretion pathway protein L 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.07387 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTGTT CAAAACCCTT GTTGGTGCTG GCATTAGGGG AGGCCGGAGC GCCAATCCTA 
TGGTGTCAGG GAGATCCGAG CGAATCGCAA TGGCGGCATG CGGGGGCAGA TACCTTGCCG
GCGACGCTGC CGATAAAGGC ATCGCGATGC AGAGTCGTGG TCTGCGTGCC GGGCCAGTCG
GTGACATTGC AGAGGGTGAC ATTCTCTGGC CCCAGCCGCG CGGCAACGCC TCTGGCCCTG
GCTTATCAGT GTGAGGATAG CCTGCTGGAG GAGGTTGAGC AGTTGTATTG GGTAATCCTG
GGTCGGCAGG ACGACCACTA TGCCCTTGCC GGTTATCGTC ATGTGGATAT GCAGCGCTGG
CTGTCGCAAT TGGAACGCTG GGGCATTGTT CCCGACAGCC TGTTGCCAGA CACGCTTTGC
GGACCGGTCA ACGACCGTCA TTTCTACCGT TGGCGGGGAA GGTTGTTGCG CAGGACGTCG
CCGTGGTCAG GCTATTCGCT GCCGTCACAG TGGCTTTTGG CTCCGTCCGA CGTCGTCGAC
GCCGTTCCCC TGTCTCCTTG CGATGTGTTG TGGGACCGGG TTCGGGGAGA GGCCGAAACG
GCAGTTTCAC TCCTGCAGGG TAAATATAAG GCGCCGCCAC GCTGGCAACG AAACCCGTTC
TGGCGCCACT GGCCCAGCAT CGCTGGGGCG GCGTTAACGC TATGCGCCCT GGCGATCGGT
GGAGCGCATT ATCACCATCA GGCTAAGCAG GCCAACCAGC AACGTGACGC TTTATATCAG
CGGCTTTTTG TTGGCCAGCC GATACCGGCG GAACCTGTGA GTGAGAGTGC GCGTTATATC
CGAGCGCTAC AAGAAGCAAA ATCTCCGCGC CAATTCTTCG AACTTGCCGC GCAGGCGCAA
CGGGCCCTGC AGGGGATCCC GAAACACCGG GTCATTGGCC TGACTTTCGA CGCCGACAGG
TCAATGCTGG CCATCAGATT ACAGGCGCCT GAATTGCAGC CCTTCACGCA AATAAATGAT
GAAGGTAACA CCCTGGAGCT GCAAGTTAAC CCGGCCAAAC AGCAGGGGAC GCTTACCCTG
AAGGAAACTC AATGA
 
Protein sequence
MTCSKPLLVL ALGEAGAPIL WCQGDPSESQ WRHAGADTLP ATLPIKASRC RVVVCVPGQS 
VTLQRVTFSG PSRAATPLAL AYQCEDSLLE EVEQLYWVIL GRQDDHYALA GYRHVDMQRW
LSQLERWGIV PDSLLPDTLC GPVNDRHFYR WRGRLLRRTS PWSGYSLPSQ WLLAPSDVVD
AVPLSPCDVL WDRVRGEAET AVSLLQGKYK APPRWQRNPF WRHWPSIAGA ALTLCALAIG
GAHYHHQAKQ ANQQRDALYQ RLFVGQPIPA EPVSESARYI RALQEAKSPR QFFELAAQAQ
RALQGIPKHR VIGLTFDADR SMLAIRLQAP ELQPFTQIND EGNTLELQVN PAKQQGTLTL
KETQ