Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4243 |
Symbol | |
ID | 5603021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4706357 |
End bp | 4707451 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640939803 |
Product | general secretion pathway L |
Protein accession | YP_001480465 |
Protein GI | 157372476 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3297] Type II secretory pathway, component PulL |
TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.07387 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGTGTT CAAAACCCTT GTTGGTGCTG GCATTAGGGG AGGCCGGAGC GCCAATCCTA TGGTGTCAGG GAGATCCGAG CGAATCGCAA TGGCGGCATG CGGGGGCAGA TACCTTGCCG GCGACGCTGC CGATAAAGGC ATCGCGATGC AGAGTCGTGG TCTGCGTGCC GGGCCAGTCG GTGACATTGC AGAGGGTGAC ATTCTCTGGC CCCAGCCGCG CGGCAACGCC TCTGGCCCTG GCTTATCAGT GTGAGGATAG CCTGCTGGAG GAGGTTGAGC AGTTGTATTG GGTAATCCTG GGTCGGCAGG ACGACCACTA TGCCCTTGCC GGTTATCGTC ATGTGGATAT GCAGCGCTGG CTGTCGCAAT TGGAACGCTG GGGCATTGTT CCCGACAGCC TGTTGCCAGA CACGCTTTGC GGACCGGTCA ACGACCGTCA TTTCTACCGT TGGCGGGGAA GGTTGTTGCG CAGGACGTCG CCGTGGTCAG GCTATTCGCT GCCGTCACAG TGGCTTTTGG CTCCGTCCGA CGTCGTCGAC GCCGTTCCCC TGTCTCCTTG CGATGTGTTG TGGGACCGGG TTCGGGGAGA GGCCGAAACG GCAGTTTCAC TCCTGCAGGG TAAATATAAG GCGCCGCCAC GCTGGCAACG AAACCCGTTC TGGCGCCACT GGCCCAGCAT CGCTGGGGCG GCGTTAACGC TATGCGCCCT GGCGATCGGT GGAGCGCATT ATCACCATCA GGCTAAGCAG GCCAACCAGC AACGTGACGC TTTATATCAG CGGCTTTTTG TTGGCCAGCC GATACCGGCG GAACCTGTGA GTGAGAGTGC GCGTTATATC CGAGCGCTAC AAGAAGCAAA ATCTCCGCGC CAATTCTTCG AACTTGCCGC GCAGGCGCAA CGGGCCCTGC AGGGGATCCC GAAACACCGG GTCATTGGCC TGACTTTCGA CGCCGACAGG TCAATGCTGG CCATCAGATT ACAGGCGCCT GAATTGCAGC CCTTCACGCA AATAAATGAT GAAGGTAACA CCCTGGAGCT GCAAGTTAAC CCGGCCAAAC AGCAGGGGAC GCTTACCCTG AAGGAAACTC AATGA
|
Protein sequence | MTCSKPLLVL ALGEAGAPIL WCQGDPSESQ WRHAGADTLP ATLPIKASRC RVVVCVPGQS VTLQRVTFSG PSRAATPLAL AYQCEDSLLE EVEQLYWVIL GRQDDHYALA GYRHVDMQRW LSQLERWGIV PDSLLPDTLC GPVNDRHFYR WRGRLLRRTS PWSGYSLPSQ WLLAPSDVVD AVPLSPCDVL WDRVRGEAET AVSLLQGKYK APPRWQRNPF WRHWPSIAGA ALTLCALAIG GAHYHHQAKQ ANQQRDALYQ RLFVGQPIPA EPVSESARYI RALQEAKSPR QFFELAAQAQ RALQGIPKHR VIGLTFDADR SMLAIRLQAP ELQPFTQIND EGNTLELQVN PAKQQGTLTL KETQ
|
| |