Gene Spro_4228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4228 
Symbol 
ID5602632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4687054 
End bp4688592 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content60% 
IMG OID640939788 
ProductABC transporter-related protein 
Protein accessionYP_001480450 
Protein GI157372461 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCGG CTACCCTGAG CGACAGGGCC TTAAACGAAT TGGCGCAGCA ACCGGTGGTG 
GCCCGTATTG AATCCGGGCA TAAGCGTTAC CCGGGGGTAG TGGCGCTGCA AGATGTGAAT
TTCACCCTGC GGCGAGGTGA GGTACGTGCC CTGCTGGGGA AAAACGGTGC GGGCAAGTCT
ACCCTGATCC GCATGCTGAC CGGCAGTGAG CGACCGGACG CCGGGCAAGT CTTTATCGGC
GACCGCTTGT TGGATGGGCC AGAGGCGTTG TTGACGCGTC GTGCCGGTGA GCTTGGCGTG
CGGGCGGTCT ATCAGGAACT CAGCCTGGTG CAGGATATGA GCGTGGCGGA AAACCTGTGC
CTGGGCGCCT GGCCACAGCG TGCCGGAGTG ATTGACGTGC AATGCATGAT GGCGCAGGCA
CGTGCTGCGC TGGCACTGCT TGGGGTAGAT ATCGATCCTC AGCAATGGGT ACGCGATCTC
AGCCCGGCGC AGCAGCAACT GGTGGAGATA GCCCGGGCTT GCCAGGGAGA TCCCAAAGTG
GTGATCCTCG ACGAGCCGAC CAGTTCGCTG GCCAACGCCG AGGCGGATCT GGTGGCTGCG
GCGGTGATGC GCCTTTCTGC GGCGGGGATT GCGGTGGTGT ATGTCAGCCA CCGGATGAAT
GAAATCCGCC GGTTGGCGTC GTCCTGCACC ATTATGCGCG ACGGCCGCGT GGCGGGTGAC
GTGACGCTGG ACAATACGAC CACCCAGCAG ATTGTCGATC TGATGCTGGG CCATCAGGAT
CACCATACGC AAACCGTGAC TGTTCCGGCG GGGGGCGAAA CGGTATTTGA GGTAAGGCAG
TTATCGCTGC CGCCCAAATT GCGGCAGGTC AGTTTTGAGC TGCGGCGCGG TGAGGTGCTG
GGCATTGCCG GGTTGCTGGG GGCGGGCCGC AGCGAATTGC TGAAGGCCAT TGTTGGCCTG
ACGCCGTTTA CCGATGGCGA ACTGGTGTTG GACGGGGAGA CGCTGATCTG CCCGAATTAT
GCCGACATGC TCAAACGGGG TATGGCCTAC ACACCGGAGA ACCGCAAGGC CGAGGGCATC
ATGCCGCTGC TGGGGGTGGA TGAGAATACC GTGATGACCG ACAGCCGCTC GGTAAGCCGC
TTTGGCGTAC TGAACTGGTC GAAGATCAAA CTGGCAACCT CGGCCATCGT CAGCCGCATG
CGGGTGAAAA CCGCTGAAAC CGGCACGCCG ATCATGACGC TCTCCGGCGG TAACCAGCAG
AAGGTGGTGA TTGGCCGTTG GGTTTACGCC AGGAGCCGCA TCTTGTTGCT GGATGAGCCG
ACGCGCGGCG TCGATGTCGA AGCGAAAAAT CAAATCTATC GTATTGCGCG CGAGCTGGCG
GCCGAAGGGA AAAGCGTTAT TTTCGTGTCG AGCGAAGTGG AGGAATTGCC TCAGGTCTGC
GATCGGATCT TATTGTTACA GCAGGGAACG ATAGTGAAGG AGTTTATCTC GCCCGTGGAT
GTTGAACAGC TGATGTCCGA AGTGCTGATG ATCCAATAA
 
Protein sequence
MSAATLSDRA LNELAQQPVV ARIESGHKRY PGVVALQDVN FTLRRGEVRA LLGKNGAGKS 
TLIRMLTGSE RPDAGQVFIG DRLLDGPEAL LTRRAGELGV RAVYQELSLV QDMSVAENLC
LGAWPQRAGV IDVQCMMAQA RAALALLGVD IDPQQWVRDL SPAQQQLVEI ARACQGDPKV
VILDEPTSSL ANAEADLVAA AVMRLSAAGI AVVYVSHRMN EIRRLASSCT IMRDGRVAGD
VTLDNTTTQQ IVDLMLGHQD HHTQTVTVPA GGETVFEVRQ LSLPPKLRQV SFELRRGEVL
GIAGLLGAGR SELLKAIVGL TPFTDGELVL DGETLICPNY ADMLKRGMAY TPENRKAEGI
MPLLGVDENT VMTDSRSVSR FGVLNWSKIK LATSAIVSRM RVKTAETGTP IMTLSGGNQQ
KVVIGRWVYA RSRILLLDEP TRGVDVEAKN QIYRIARELA AEGKSVIFVS SEVEELPQVC
DRILLLQQGT IVKEFISPVD VEQLMSEVLM IQ