Gene Spro_4147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4147 
Symbol 
ID5603706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4601235 
End bp4601777 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content53% 
IMG OID640939707 
Productfimbrial protein 
Protein accessionYP_001480369 
Protein GI157372380 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAT TAACCGGTTA TGTGGCGTTT TCCCTATTGG CAGTGTTGCT GGTTCGTTTG 
CCGGCAGTGG CTGCATCAAC CCCTGCAGGT TGGGGCAGAG TCAATATGGA AGGGGCTATT
CTCGATACCG CCTGCGCAAT AGAGGCTGGA AGCCGGGATC AGAGCATAGA AATGTCTACA
CTGCCGCTCA GTCAGATTAT TCGTGATGGG CAGGGGCTAA CGAAACCCTT CACTATCCGT
TTGGTGAACT GTGTCTTATC CCGGGCAACG GCTGGCCTGC CGGACTGGCA GCGATTTCAG
GTGACATTTG ACGGAGATGG TCGTAACGGA CTGTTTCAGG TGCATGGTGA GGCGCGAGGT
GTGGCGCTGC AAATCACCGA TGCGCGGGGC AATATTGCTT TACCGGGCAA GCCATTACCG
ATGAGTGACG TGAATCCTGG CAATATGGAC CTTAATTATT TCCTGCGTCT GGTCGGCGAT
CAGAATGTAT TGCGGGCAGG GGAATACTAT TCTGCCGTAC GTTTTAAGCT GGATTATTAC
TGA
 
Protein sequence
MKRLTGYVAF SLLAVLLVRL PAVAASTPAG WGRVNMEGAI LDTACAIEAG SRDQSIEMST 
LPLSQIIRDG QGLTKPFTIR LVNCVLSRAT AGLPDWQRFQ VTFDGDGRNG LFQVHGEARG
VALQITDARG NIALPGKPLP MSDVNPGNMD LNYFLRLVGD QNVLRAGEYY SAVRFKLDYY