| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4144 |
|---|
| Symbol | |
|---|
| ID | 5603747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 4597207 |
|---|
| End bp | 4597875 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640939704 |
|---|
| Product | fimbrial protein |
|---|
| Protein accession | YP_001480366 |
|---|
| Protein GI | 157372377 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.370887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACAAC AAAACAAAAC TGTGTGCCTG CCGCCGTCAC GCCATGAGCG GCTGTACCGG
TGGAGTTTGG CCGCATTGGT GATGATGGTG CCGGTGGTGA TTGTCGTCGG CTGGTTGTTG
ATCCCCTCAG CGCGGGCGGC GGACTGGGTA TTGACCGAAC ATGGCGATGT GGACGGCAAC
AGCGGCCAGT TGTGGGTACA CGGCGCGTTG ACGGAAAGCG CCTGTCGGCT GGACATGGCG
TCCGCCTATC AGGACGTGAA CCTGGGGGAT GTCGGTACCG GGCGCTTGCT GAATGTCGGC
GATCGCGGCA CGCCGGTGGC GGTACAACTG CACCTGCGCG ATTGTCTGCG CATGTCCGGC
GGTAGCCAGG ATGGCCGAAC CGGTAATCTG GTCTGGAGCG CCAGCCAGCC GGCAGTGTCG
TTGAGCTTTA TCGCACCGAT GGATCCAGAT ACCCCTGGAT TGGTGCAGGT GCGGGGCGCA
AAAGGGATCG GGTTGCGGTT GCTGGACGAA CAACTGCGGG ATATCCGTCT CGGGGAGCGG
GGGCCAAAAC AATGGCTGAC GCCGGGATTG GCCACGCTGA CTTATACGAT TGCGCCGGAG
CGGACCGCTG CACCACTGCA GGCCGGGGCA TACAGGGCGA CGGTGGATTT CCGACTGAGT
TATGACTGA
|
|---|
| Protein sequence | MRQQNKTVCL PPSRHERLYR WSLAALVMMV PVVIVVGWLL IPSARAADWV LTEHGDVDGN
SGQLWVHGAL TESACRLDMA SAYQDVNLGD VGTGRLLNVG DRGTPVAVQL HLRDCLRMSG
GSQDGRTGNL VWSASQPAVS LSFIAPMDPD TPGLVQVRGA KGIGLRLLDE QLRDIRLGER
GPKQWLTPGL ATLTYTIAPE RTAAPLQAGA YRATVDFRLS YD
|
|---|
| |