Gene Spro_4142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4142 
Symbol 
ID5603813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4596157 
End bp4596669 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content54% 
IMG OID640939702 
ProductMrfE protein 
Protein accessionYP_001480364 
Protein GI157372375 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.263878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATA ACCAGGTTGG CCTAAACAAT GACCGGGCCA GGTATTGCGG CCTGTTGCTG 
CTATTTTCGT GCGGGCTGGT GCAGGCTCAG GATCGAGTGA ACTTTAACAT TCAGGTGATA
GAAGGCCCGC CGTGCAACAT CAATAATGGC CAGGCTATTG AAGTTAACTT TGGCGATGAC
CTGCTGATCA CCCGGATCGA CGGCGTGAAT TACAGCAAGA CCATCGATTA CACCCTGGAC
TGCCGCGAAG CGGGCAATAA TGCGATTCGG ATGCAGATAC AGGGGCTTGT AGCCTCTTTC
GATGGCAATG TGCTGGCGAC GGTAGAGCGG CCGGAACTTG GGGTCGCGAT AAAACTCGCC
AATGCCATGC CCATGCCGGT AAACGGCTGG TTAAACCTGG CGAGTTCGTC GACAAAACCG
GCACTAACAG CGGTTCCGGT AAAAGCACCG AACAGTGTGC TGCAGCCGGG GAGATTTTCC
GCCGGCGCCA CCATGTTATT TGAATATCAA TAA
 
Protein sequence
MNDNQVGLNN DRARYCGLLL LFSCGLVQAQ DRVNFNIQVI EGPPCNINNG QAIEVNFGDD 
LLITRIDGVN YSKTIDYTLD CREAGNNAIR MQIQGLVASF DGNVLATVER PELGVAIKLA
NAMPMPVNGW LNLASSSTKP ALTAVPVKAP NSVLQPGRFS AGATMLFEYQ