Gene Spro_4141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4141 
Symbol 
ID5603812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4595646 
End bp4596146 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content53% 
IMG OID640939701 
Productfimbrial protein 
Protein accessionYP_001480363 
Protein GI157372374 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.513852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATA AACACATTTT GCGGGCAGCC GCTGCCTGCT CGTTGGCGGT ATTACTGGGC 
GGTTTACCCG TGCGAGCGGA AGAGAACATG CGTTTTCTGG GGACGTTGAT CTCCCCGCCG
CCCTGCATCA TCAATGGCGG CCAGATGATC GAAGTGAATT TTGGCGATGA GCTGGTGACT
AGCCGCATAG ATGGGGTTAA TTACCGCAAG GACATCGACT ACAGCCTGGA TTGCCGTAAT
GCGGGTGCCA ATTCTGTTCA GATGCAAATT CAAGGTAACG CCGCTACCTT TGATGGCTCC
GTGCTGGCGA CCGTTGAACG CAGTGAGCTG GGTATTGCTT TGAAGACAGA GGCTGGCCCA
CCGATGAATA TTAATACCTG GCATAAAATA CAGTTCGGTG CAACGCCAAA ATTGGCTGCG
GTGCCGGTGA AAGCGACGGG TAGCCAGTTG CAAGCAGGGA GCTTTACCGC TGGCGCTACG
ATGCTGATTG AATATCAATG A
 
Protein sequence
MQNKHILRAA AACSLAVLLG GLPVRAEENM RFLGTLISPP PCIINGGQMI EVNFGDELVT 
SRIDGVNYRK DIDYSLDCRN AGANSVQMQI QGNAATFDGS VLATVERSEL GIALKTEAGP
PMNINTWHKI QFGATPKLAA VPVKATGSQL QAGSFTAGAT MLIEYQ