| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_4086 |
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| Symbol | |
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| ID | 5607115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | - |
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| Start bp | 4543239 |
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| End bp | 4546103 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640939647 |
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| Product | putative plasmid-related protein |
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| Protein accession | YP_001480309 |
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| Protein GI | 157372320 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTTT CCCTGTTTGA TAAAAAGCGC CTGACGCGCA AGACGCCGTC GGTACCGGAG
GCGGTTGCCC AGGATACATT GTCTGCGACC GAGGATGGCG TGCCGCTGTC CGTAGACGGA
CGTGAGCCGT TACGGCGGCC CGGCAAGATG ACGGTAAAGG ATGAGCAGCA GGTGTATCAC
GCCAATCCGT CCATCGTTGA TTACCTGCCC TGGGCGGAAT TTCTCGACCG CGAACAGTGT
ATTTTGCTCG ATGACGGTGT GTCCGTCGGG GCTGTTTTTG ACATCACGCC GGTAGCGACC
GAAGGACGCA CGGACGATCG CCTGGAGCAA ATGCGCGACA CGGTGGAAGA CGCACTGCAG
GATTCGTTTG ACGAGCATGA TGAAAACCCC TGGGTGGTGC AGTTCTTTTG CCAGGATGAA
AACAACGTCG AGGCGTATAT CGATCGCCTG AGAAATTACG TCAAACCCCA CGCCCAGGGC
AGCGCGTTCA CCGAAGACTG GCTGAAAGAA ACCGAACGTC ATATGCGCGG TATCGCCCGT
CCGGAAGGCC TGTTCAAGGA TACGCTGATC ACCGACCAGC CGTGGCGCGG GCAGCAACGC
CGCACCCGCA TGGTGGTGTA TCGCTGGATT GGCAAGGGTA ATCATGATCC GATGCCGCCG
ATCGCCATGC TGAATCAGAC CTGTGAGCGG GTGACCGGGG CGCTCGCCGG CGCCGGTGTG
ATCTGCGTGC GCCAGAACGG GGCGCAGGTC CATGACTGGC TGCTGCGTCA TTTTAATCCG
AGCCCGGAAT GGGTGGAAAA AGAGACTCTG TACCGAAACG CCGCCTATTT CGACAGTCGT
GACACGCCGG AAGGCGCCAT GCCGGTGCAG AATGATTTTG CCGAGACCCT GTTGTTCACC
CCGCCCGTGT CCGATCCGGA TCAGGGGGTA TGGTGGTTCG ATAACCAGGC GCATTGCGCC
ATTCCCGTCG AGAAGCTGCG CCGCCCGCCG GAGCCGGGGA CTATCACCGG TGAAATGAAA
CGCGGCGAGA AGAAAATCAA TGCGCTGATG GACCTGTTCC CGGAGGGAAC GATGCTGTGC
ATGACCATCG TGGTACAGCC TCAGGACACG CTGGAGAATG ATTTCAACAA GCTGTCGAAA
AACGCCGTCG GCGAGAATAC CGAGTCCGGC CGCGTGCGTC AGGACGTGGC TCAGGTGAAA
GAGTACCTTG GGAATCGCCA CAAGCTGTAC CGTGCCGGCA TTACGTTCCT GCTGCGTGCC
GGCGACCTGA CCACACTCAA CCACAAACGT GTCGATCTGA CCAACGTGCT GCTGGGCGCC
GGCCTGCAGC CGGTACGGCC GGAGTTTGAT GTGGCGCCGC TCAATACCTA CCTGCGGGCG
TTACCGATGT GTTTTAACCC GGAGACCGAC AAGAAACACT GGTATACCCG CCTGACCTGG
GTGCAGCATC TGGCAGGGTT GTTGCCGGTG ACCGGCCGTG AGACCGGAAC CGGTAATCCC
GGTATGAGCT TCTTCAATCG TGGCGGGGAT ACGCTGACGG TTGACCCGCT CAACAAGCAT
GACCGCAGCC AGAATGCCCA TATGCTGTAT TTTGGCCCGA CCGGCGCGGG AAAATCGGCG
ACGCTGTGTG CGACCTTATC GCAACTGATG GCGATACATC GGCCGCGGTT GTTTATCGCA
GAAGCGGGCA ACTCGTTTGG GTTGCTGGCC GATTACTTCG AGAGTCAGGG GCTCAGCGTC
AACAAGGTGA GCATCAAGCC AGGCAGTGGT GTCTCGCTGC CGCCGTTCTC CTATGCGCAC
AAGCTGGTCG AAGATGCATT AACGACGCTG GCCCTGGATG AAAATGACCT GCCGGACATC
GATGCCGATG ACGACGACGA TGACGACAAG CGAGATTACC TGGGTGAAAT GGAAATCTCG
GCGCGCATGA TGATCACTGG CGGTGATGCG AAGGAAGAGC ACGAGTTGAA GCGTGCCGAC
CGGGCGATGA TCCGTGAAGC CCTGTTGATG GCGGCGCGTC AGACCTATGA CGAAGGGCGG
CAGATGTTGC CGGCAGATCT GCAGAAGGCG CTGTACACCC TCTCCAAAGA CGAAGGGAGT
GATATCCGTA ATGAGCAGCG TCGGGCCAAG GCGGCTGAAA TGGCCGAGTC GCTCGGGATG
TTTACCCAGG CCGGCAGCTT CGAGGCGGGG CTGTTTAACC GCGAGGGTAG CCTGTGGCCA
GAAGCGGATG TCACCCTGAT TGACCTGGGG CATCTGGCGC GTGAGGGGTA TGAGGCGCAG
ATGGCGCTGA CGATGGTGAG CCTGACCAAC ACCATCAACA ACATTGCCGA AAGAGACCAG
TACTCGGAGC GGGACATCGT GTTTGCGGTG GATGAAGCGC ATATCGTGAC GGTGAACCCG
CTGCTGGCGC CGTACATGAC CAAAATCGTC AAGATGTGGC GTAAGCTCGG TGCTTGGTTG
TGGCTGGCGA CACAGAACTT AAAAGACTTC CCGGACATTG CCGAGAAGAT GCTGAACATG
GCGGAGTGGT GGGTCTGTCT GACCATGCCG CCGGAGGAGG TCAATGACAT TGCCCGCTTC
AAGGCGCTGA CCGAGGAGCA AAAGGCGGTG CTGCTGTCGG CCAGTAAGCT GTCCGGTTGC
TATACCGAGG GAGTGGTGCT GTCGAAAAAA CTCGAGGCGC TGTTCCGTGC GGTACCGCCA
AGCCTGTATC TGGCCCTGGG GATGACCGAG AAAGAAGAGA AGGCCGAGCG CCGCGCGCTG
ATGCAGGAGT TTGGTTGCAG TGAACTCGAG GCCGCCCGCA AGGTGGCGCA AAAGCTTGAC
CGCCTGCGCG GTCTGACGGC GAACGGGGAG GTTCGGGCTG CATGA
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| Protein sequence | MRFSLFDKKR LTRKTPSVPE AVAQDTLSAT EDGVPLSVDG REPLRRPGKM TVKDEQQVYH
ANPSIVDYLP WAEFLDREQC ILLDDGVSVG AVFDITPVAT EGRTDDRLEQ MRDTVEDALQ
DSFDEHDENP WVVQFFCQDE NNVEAYIDRL RNYVKPHAQG SAFTEDWLKE TERHMRGIAR
PEGLFKDTLI TDQPWRGQQR RTRMVVYRWI GKGNHDPMPP IAMLNQTCER VTGALAGAGV
ICVRQNGAQV HDWLLRHFNP SPEWVEKETL YRNAAYFDSR DTPEGAMPVQ NDFAETLLFT
PPVSDPDQGV WWFDNQAHCA IPVEKLRRPP EPGTITGEMK RGEKKINALM DLFPEGTMLC
MTIVVQPQDT LENDFNKLSK NAVGENTESG RVRQDVAQVK EYLGNRHKLY RAGITFLLRA
GDLTTLNHKR VDLTNVLLGA GLQPVRPEFD VAPLNTYLRA LPMCFNPETD KKHWYTRLTW
VQHLAGLLPV TGRETGTGNP GMSFFNRGGD TLTVDPLNKH DRSQNAHMLY FGPTGAGKSA
TLCATLSQLM AIHRPRLFIA EAGNSFGLLA DYFESQGLSV NKVSIKPGSG VSLPPFSYAH
KLVEDALTTL ALDENDLPDI DADDDDDDDK RDYLGEMEIS ARMMITGGDA KEEHELKRAD
RAMIREALLM AARQTYDEGR QMLPADLQKA LYTLSKDEGS DIRNEQRRAK AAEMAESLGM
FTQAGSFEAG LFNREGSLWP EADVTLIDLG HLAREGYEAQ MALTMVSLTN TINNIAERDQ
YSERDIVFAV DEAHIVTVNP LLAPYMTKIV KMWRKLGAWL WLATQNLKDF PDIAEKMLNM
AEWWVCLTMP PEEVNDIARF KALTEEQKAV LLSASKLSGC YTEGVVLSKK LEALFRAVPP
SLYLALGMTE KEEKAERRAL MQEFGCSELE AARKVAQKLD RLRGLTANGE VRAA
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