Gene Spro_4082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_4082 
Symbol 
ID5606979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4535688 
End bp4538279 
Gene Length2592 bp 
Protein Length863 aa 
Translation table11 
GC content45% 
IMG OID640939643 
Producttype I restriction-modification system, M subunit 
Protein accessionYP_001480305 
Protein GI157372316 
COG category[V] Defense mechanisms 
COG ID[COG0286] Type I restriction-modification system methyltransferase subunit 
TIGRFAM ID[TIGR00497] type I restriction system adenine methylase (hsdM) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATAAAC AACAGCTTGC GGCAAAAATC TGGGAATCTG CTAACCAGAT GCGTTCTAAG 
ATTGAAGCCA ACGAATACAA AGACTACATA CTCGGCTTTA TCTTCTACAA GTACCTAAGC
GACCAGCTAG TGCAGTTTGT CACCAGACAG GGGATGACGT CTGAAGACAT CAAAACCCTC
AATGAAGAAG ACACCGACAC AGTTGAATAC GTGCAAAGCA ACCTGGGCTA CTTTATTGCC
TACGATAATC TGTTTTCTAC ATGGATTGAT CCAACATCCG AATTTGATGA ATCTAACGTG
CGAGATGCGC TCTCGGCCTT TAGCCGTTTG ATTTCGCCAA CTTACAAAAA ACTGTTTGAC
GGTATTTTTA CCACCTTAGA AACAGGTTTA AGCAAACTGG GTGAAAGTGC AGGCAAACGC
ACCAAAGCCA TCAGCGACTT ACTACACCTG ATCAAAAGCA TTCCCATGAA TAGTAATCAA
GGGTATGACG TACTGGGCTA CATTTACGAA TACCTGCTTG AGAAATTTGC TGCCAATGCG
GGTAAAAAAG CCGGTGAGTT TTACACGCCT CATGAAGTCT CGGTACTCAT GTCAAACATC
ATCGCCCATG AGTTAAAACA CAAAGATACC ATTAAAATTT ACGACCCTAC TTCCGGCTCT
GGCTCGTTGC TAATCAATAT CGGTGAGGCG TTCGAGAAAT ACGCTAAAAA CAAAGACAGC
ATCACCTATT TCGCCCAAGA GTTAAAAGCC AATACCTACA ACCTAACCCG TATGAATCTC
ATCATGCGCG GTATCAAAGC CAGCAACATT AAAACCCGTA ATGGCGACAC CCTGGAAGAG
GATTGGCCGT ATTTTGATGA CAGCGATCCC CAAGGTTCAT ACTACGCCTT ACATGTCGAT
GCCGTGGTAT CCAACCCGCC TTACTCACAA AACTGGGACC CCAGCTTTAA AGAGAGCGAT
CCACGCTATT CACGTTTTGG CCTGGCACCT AAAACCAAAG CTGATTTTGC TTTTTTACTG
CACGACCTCT ACCACCTAAA ACCCGATGGC ATTATGGCTA TAGTTCTTCC CCATGGTGTC
TTGTTCCGTG GCGGTGAAGA AGGTCAAATT CGCAAGCAAC TCATTGAGCA GAATCATATT
GAGACCGTTA TCGGTTTACC GGCCAATATC TTTTTTGGCA CCGGCATTCC AACGGTGATT
TTAGTACTCA GACAAAAACG CCAAAACACC GATGTATTGG TAGTCGATGC CTCCAAACAC
TTTATGAAAG AAGGCAAAAA CAACAAACTG CAAGCCAGTG ATATCAAGCG CATTACTGAT
GCGGTGATTA ACCGAGAGAG TATCGACAAG TTCTCACAAC TGGTGAGCAA AGAAACCCTG
CGCGACAACG GTTACAACCT CAACATACCG CGCTATGTGG ATTCCTCTGA GACGGCACAA
ACCTGGGATT TACACGCCAC CATGCTCGGC GGCATCCCCA ACTGCGAAAT TGCCGAGCTA
CACAATTTTT GGCAAGCTTT CCCGCAATTA CACGGCACTC TGTTTACGCC AAAATCCGCC
GCTTACAGTG AGCTGGCCAT TGCCAAACAA GACGTTAACG CCAGCATCAG TGGGCACCCA
CAAGTGTTAG CGTTTATCAG CGCCTACAAC CAAGCCTTTA ATAGCTTTGA TGACCACCTA
AACACCCAAT TAATACAAAA CTGGGAAAGC GTAAAGCGTA ACCAACAAGA GGCGGTATTA
AGTGCCAAGC TATTTACTCG CTTAGCCCCT ATTGCCTTAA TCGACAAATA CCAGGCTTAC
CAATTTCTAA ACAACCAATG GCAACTCATC AGCGCCGATT TAGAAATGAT GCAAACCGAA
GGCTTTGCCG CCGCCAAACA AGTTGCTCCC AATATTGTTA TAAAGAAAAA AAACGGCCAA
GACACCGAGG TACAAGATGG CTGGAAAGGC CACATACTGC CGTTTGATTT AGTGCAACAA
ACTTACTTAA GTGATGACTT ACAAGCCTTG GCAGCTCAAG AAACTCGCCT GGCAGAGATC
GCCAGCACGC TGGAAGAAAT TTTAGAATCC CTGAGCGAAG AAGAAAAAGA ACAAGATACG
GTAAAAGAAA GCAAAGATGG CTTTTCCAAT GCCGAATTAA GCAAAGCCGC CAAAGCCTTC
TTGAAAGAAC AAAAAGATAG CAAAGTTAAA TTCGCAGAAG AAAGCTATGA AACCAAAATC
ATTCGCGCAA GCAAATTAAT TGATGAAGAA AAAGCCCTGA AAAAAATGGT CAAAGATGCG
GCCGCTACCC TGCACTCAAA AACCAAAACA ACCATAGAAA CCTTAACCGA TGAACAGGTG
AACAACCTGC TGCACCTTAA ATGGATTGCG CCATTAAGCA CCGAACTCGC CGCCATGCCA
AACGCCGTGA TTAGCCAACT GACTAGCCAA GTGCAAGCCC TTGCTGATAA ATACGCCGTC
ACTTACTCGC AGGTGGCTAA TGAGATTAAA ACCACCGAGC AAGAACTGGC GGAAATGATG
GGTGAACTCA CCGGTAATGA GTTTGATATG CAAGGCTTGG TAGAGCTCAC TAACTTATTG
AAGGATGAAT AA
 
Protein sequence
MNKQQLAAKI WESANQMRSK IEANEYKDYI LGFIFYKYLS DQLVQFVTRQ GMTSEDIKTL 
NEEDTDTVEY VQSNLGYFIA YDNLFSTWID PTSEFDESNV RDALSAFSRL ISPTYKKLFD
GIFTTLETGL SKLGESAGKR TKAISDLLHL IKSIPMNSNQ GYDVLGYIYE YLLEKFAANA
GKKAGEFYTP HEVSVLMSNI IAHELKHKDT IKIYDPTSGS GSLLINIGEA FEKYAKNKDS
ITYFAQELKA NTYNLTRMNL IMRGIKASNI KTRNGDTLEE DWPYFDDSDP QGSYYALHVD
AVVSNPPYSQ NWDPSFKESD PRYSRFGLAP KTKADFAFLL HDLYHLKPDG IMAIVLPHGV
LFRGGEEGQI RKQLIEQNHI ETVIGLPANI FFGTGIPTVI LVLRQKRQNT DVLVVDASKH
FMKEGKNNKL QASDIKRITD AVINRESIDK FSQLVSKETL RDNGYNLNIP RYVDSSETAQ
TWDLHATMLG GIPNCEIAEL HNFWQAFPQL HGTLFTPKSA AYSELAIAKQ DVNASISGHP
QVLAFISAYN QAFNSFDDHL NTQLIQNWES VKRNQQEAVL SAKLFTRLAP IALIDKYQAY
QFLNNQWQLI SADLEMMQTE GFAAAKQVAP NIVIKKKNGQ DTEVQDGWKG HILPFDLVQQ
TYLSDDLQAL AAQETRLAEI ASTLEEILES LSEEEKEQDT VKESKDGFSN AELSKAAKAF
LKEQKDSKVK FAEESYETKI IRASKLIDEE KALKKMVKDA AATLHSKTKT TIETLTDEQV
NNLLHLKWIA PLSTELAAMP NAVISQLTSQ VQALADKYAV TYSQVANEIK TTEQELAEMM
GELTGNEFDM QGLVELTNLL KDE