Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_4012 |
Symbol | pdhR |
ID | 5604674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4451469 |
End bp | 4452233 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640939572 |
Product | transcriptional regulator PdhR |
Protein accession | YP_001480235 |
Protein GI | 157372246 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.152194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.323384 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTACA GCAAAATCCG CCAACCCAAG TTGTCAGACG TCATCGAGCA GCAGCTCGAA CACCTGATCC TCGAGGGAAC ACTGCGTCCA GGCGAAAAAC TGCCACCGGA GCGTGAACTG GCGAAACAAT TTGATGTTTC CCGTCCTTCT CTGAGAGAGG CTATCCAGCG CCTGGAAGCC AAAGGGTTGC TCCTGCGCCG TCAGGGCGGT GGCACCTTTG TACAAACTAA TCTGTGGCAG AGCTTTAGCG ATCCGCTGGC TGAACTGCTG GCCGACCATC CTGAATCACA ATTCGATCTG TTGGAAACCC GTCATGCCCT CGAAGGCATT GCTGCCTATT ACGCGGCGTT GCGCGGTACC GACGAAGATC TGGCACGCAT CCGCGATTGC CATATGCTGA TTCAGCAGGC CCAGGACAGC GGCGATCTCG ACGCCGAAGC CGACGCGGTC ATGCAATACC AAATCGCCGT GACCGAAGCT GCCCACAACG TTGTGTTACT GCACCTGCTG CGCTGTATGG GGCCGATGCT GGAACAGAAC GTCCGTCAGA ACTTTGAATT GCTCTACTCG CGCCGTGAGA TGTTGGCAAA AGTGAGCAGC CACCGCGCCG GAATTTTTGA GGCGATTGTG GCACGCGAGC CAGAAAAAGC TCGTGAAGCC TCGCACCGCC ATTTGGCGTT TATCGAGGAA ATCTTGCTGG ATCTCAGTCG GGAGCATACC CGACGCGAGA GATCGCTGCG GCGTCTCCAG CAACGCAAGG ATTAA
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Protein sequence | MAYSKIRQPK LSDVIEQQLE HLILEGTLRP GEKLPPEREL AKQFDVSRPS LREAIQRLEA KGLLLRRQGG GTFVQTNLWQ SFSDPLAELL ADHPESQFDL LETRHALEGI AAYYAALRGT DEDLARIRDC HMLIQQAQDS GDLDAEADAV MQYQIAVTEA AHNVVLLHLL RCMGPMLEQN VRQNFELLYS RREMLAKVSS HRAGIFEAIV AREPEKAREA SHRHLAFIEE ILLDLSREHT RRERSLRRLQ QRKD
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