Gene Spro_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3972 
Symbol 
ID5603149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4400159 
End bp4401079 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content58% 
IMG OID640939532 
Productagmatinase 
Protein accessionYP_001480195 
Protein GI157372206 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID[TIGR01230] agmatinase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCT TAGGCCATAA GTCCGATAAT TCTTTAGTGT CCAACGCCTT TGGTTTCCTG 
CGCTTTCCGC TGAACTTTAT GCCTTACGAC AGCGATGCAG AGTGGGTCAT CACCGGCATT
CCATTTGACA TGGCAACCTC CGGCCGCGCC GGTGGCCGTC ATGGCCCTGC GGCGATCCGT
CAGGTTTCTA CTAACCTGGC CTGGGAAGGC AACCGCTGGC CGTGGAACTT TGACCTGCGC
GATCGTGTGA ACGTCGTCGA TTGTGGCGAC ATCGTGTTCA ACTTTGGTGA TGCTCAGAGC
ATGAGCGACA ACCTGCAGGC GCACGCGGAA AAACTGCTGG CGGCCGGTAA ACGTATGCTC
TCATTCGGCG GCGACCACTT CGTCACGTTG CCACTGTTGC GCGCGCACGC CAAACATTTC
GGCAAAATGG CGCTGGTGCA TTTCGATGCC CATACCGACA CCTACGCCAA CGGCAGCCAA
TACGACCACG GCACCATGTT CTTCCATGCG CCGAACGAAG GCCTGATCGA TCCAACACAC
TCGGTGCAGA TCGGTATCCG TACCGAATAC GATCACGACA ACGGCTTTAC CGTATTGGAT
GCTGCGCAGG TTAACGATCG CAGCGCGGAC GACCTGTTGG CCCAGATCAA ACAGATCGTC
GGCGATATGC CGGTCTACCT GACCTTCGAT ATCGACTGTC TGGATCCGGC GTTCGCACCG
GGCACCGGCA CGCCGGTGAT CGGCGGCCTG ACCTCCGATC GCGCGCTGAA ACTGGTTCGC
GGCATGCAAT CACTGAACAT CGTGGGTATG GACGTAGTGG AAGTGGCACC GGCCTACGAT
CAGTCCGAGA TCACCGCGCT GGCTGCGGCG ACCCTGGGCC TGGAAATGCT GTATCTGCAG
GCAGCAAAAA AAACCAAATA A
 
Protein sequence
MSTLGHKSDN SLVSNAFGFL RFPLNFMPYD SDAEWVITGI PFDMATSGRA GGRHGPAAIR 
QVSTNLAWEG NRWPWNFDLR DRVNVVDCGD IVFNFGDAQS MSDNLQAHAE KLLAAGKRML
SFGGDHFVTL PLLRAHAKHF GKMALVHFDA HTDTYANGSQ YDHGTMFFHA PNEGLIDPTH
SVQIGIRTEY DHDNGFTVLD AAQVNDRSAD DLLAQIKQIV GDMPVYLTFD IDCLDPAFAP
GTGTPVIGGL TSDRALKLVR GMQSLNIVGM DVVEVAPAYD QSEITALAAA TLGLEMLYLQ
AAKKTK