Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3966 |
Symbol | |
ID | 5603545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4394951 |
End bp | 4395706 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640939526 |
Product | short chain dehydrogenase |
Protein accession | YP_001480189 |
Protein GI | 157372200 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGGCC TGCTGACGGG GAAACGTATT GTGGTGACTG GCGCGGCACG CGGGCTGGGG CGTAGTTTCG CCGCCGCTAT TGCCGCCGCC GGTGCCAAGG TGGTGATGTG CGATATTCTG GCGGATGAAT TGGCAGACGC TGCCGTCAGC CTGCGCGAGC AGGGGGCTCA GGTCGAAAGC CAGGTTATCG ATCTGGCCGA TCCTGCCTCG ATCAGCGCCG CGTTTAACGC CATCGCCGCA GGCGGAGCGA TCGACGGGTT GGTGAACAAT GCGGCCCTGG CCACCGGCGT CGGCGGCAAA ACCATGATGG AATACGACAT CGATCTGTGG GATCGGGTGA TGCAGGTTAA CGTACGCGGC ACCTGGCTGG TGAGCCAGGC GGCGGTACCG CTGCTGGCTC AAACCCCGCA TGCCAAGATC GTTAACGTGG CTTCGGATAC CGCGCTGTGG GGCGCTCCGC GCTTAATGGC CTATGTGGCC AGCAAAGGGG CGATTATCTC GATGACCCGC TCGATGGCGC GTGAGCTGGG CCCGCAGGGC ATTTGCGTCA ATGCCATCGC ACCGGGCCTG ACGCGGGTGG AGGCCACGGA ATACGTGCCT GCCGAGCGTC ACCAATTGTA CGAGCAGGGC CGGGCCTTGG CCGGGGCGCA GCATCCTGAC GACGTCAACG GCACGGTGCT CTATCTGCTG TCACCGTTGG CGAACTTCGT GACCGGTCAG TTGTTGCCGG TTAACGGCGG CTTCGTCTTT AACTAA
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Protein sequence | MNGLLTGKRI VVTGAARGLG RSFAAAIAAA GAKVVMCDIL ADELADAAVS LREQGAQVES QVIDLADPAS ISAAFNAIAA GGAIDGLVNN AALATGVGGK TMMEYDIDLW DRVMQVNVRG TWLVSQAAVP LLAQTPHAKI VNVASDTALW GAPRLMAYVA SKGAIISMTR SMARELGPQG ICVNAIAPGL TRVEATEYVP AERHQLYEQG RALAGAQHPD DVNGTVLYLL SPLANFVTGQ LLPVNGGFVF N
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