Gene Spro_3966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3966 
Symbol 
ID5603545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4394951 
End bp4395706 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID640939526 
Productshort chain dehydrogenase 
Protein accessionYP_001480189 
Protein GI157372200 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGGCC TGCTGACGGG GAAACGTATT GTGGTGACTG GCGCGGCACG CGGGCTGGGG 
CGTAGTTTCG CCGCCGCTAT TGCCGCCGCC GGTGCCAAGG TGGTGATGTG CGATATTCTG
GCGGATGAAT TGGCAGACGC TGCCGTCAGC CTGCGCGAGC AGGGGGCTCA GGTCGAAAGC
CAGGTTATCG ATCTGGCCGA TCCTGCCTCG ATCAGCGCCG CGTTTAACGC CATCGCCGCA
GGCGGAGCGA TCGACGGGTT GGTGAACAAT GCGGCCCTGG CCACCGGCGT CGGCGGCAAA
ACCATGATGG AATACGACAT CGATCTGTGG GATCGGGTGA TGCAGGTTAA CGTACGCGGC
ACCTGGCTGG TGAGCCAGGC GGCGGTACCG CTGCTGGCTC AAACCCCGCA TGCCAAGATC
GTTAACGTGG CTTCGGATAC CGCGCTGTGG GGCGCTCCGC GCTTAATGGC CTATGTGGCC
AGCAAAGGGG CGATTATCTC GATGACCCGC TCGATGGCGC GTGAGCTGGG CCCGCAGGGC
ATTTGCGTCA ATGCCATCGC ACCGGGCCTG ACGCGGGTGG AGGCCACGGA ATACGTGCCT
GCCGAGCGTC ACCAATTGTA CGAGCAGGGC CGGGCCTTGG CCGGGGCGCA GCATCCTGAC
GACGTCAACG GCACGGTGCT CTATCTGCTG TCACCGTTGG CGAACTTCGT GACCGGTCAG
TTGTTGCCGG TTAACGGCGG CTTCGTCTTT AACTAA
 
Protein sequence
MNGLLTGKRI VVTGAARGLG RSFAAAIAAA GAKVVMCDIL ADELADAAVS LREQGAQVES 
QVIDLADPAS ISAAFNAIAA GGAIDGLVNN AALATGVGGK TMMEYDIDLW DRVMQVNVRG
TWLVSQAAVP LLAQTPHAKI VNVASDTALW GAPRLMAYVA SKGAIISMTR SMARELGPQG
ICVNAIAPGL TRVEATEYVP AERHQLYEQG RALAGAQHPD DVNGTVLYLL SPLANFVTGQ
LLPVNGGFVF N