| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3940 |
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| Symbol | |
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| ID | 5603917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 4364353 |
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| End bp | 4365051 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640939500 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001480163 |
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| Protein GI | 157372174 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGA TTATCGATAC CTTTATTGCC CCGCCGTGCC ATGAGCAGAT CGAGATCCTC
TATCAGGACG AGAGTCTGGT GCTGATCAAC AAACCCACCG GGTTGCTCAG CCTGTCGGGG
AAAAATCCGC AAAATCTCGA TTCAGTGCAT CATCGGCTGG TACAGCAATT CCCCGGCTGC
ACGTTGATCC ACCGCCTGGA TTTCGGCACT TCCGGGCTGA TGGTGATTGC CCGCAATAAG
GCTATCAATG CCGCCCTCTG CCAGCAGTTC AGCCAGCGTA CCGTGACCAA AGTGTACAGC
GCACTGCTGT GCGGGCATCT GGCCGATAAC GAAGGGGTGA TAGACGCCGC GATTGCCAAA
GATCCGGCGT TGTTCCCGCT GATGTCGATT TGCGCCATCC ACGGCAAGCC CGCTCGCTCC
GGCTATCAGG TCATTGAGCG CTTTTATCAT GAGTTGGAAG ACGGAACGTC ACTGCCATTG
ACGCGGGTGC AGCTAACCCC GGAAACCGGG CGTACTCATC AACTGCGCAT CCACTGTCAG
CAATTGGGCC ACCCTATTTT GGGCTGTGAC CTGTATGGCG GTCTCCTGCT GCCCGGCACC
GAACGGACCC CGCGGCTGAT GCTGCACGCC AGTGAGCTGC ATTTTGTTCA TCCTATCAGC
CAAGAGCCGA TCAAAGCCCA TCACGCCAGC CCGTTCTGA
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| Protein sequence | MSKIIDTFIA PPCHEQIEIL YQDESLVLIN KPTGLLSLSG KNPQNLDSVH HRLVQQFPGC
TLIHRLDFGT SGLMVIARNK AINAALCQQF SQRTVTKVYS ALLCGHLADN EGVIDAAIAK
DPALFPLMSI CAIHGKPARS GYQVIERFYH ELEDGTSLPL TRVQLTPETG RTHQLRIHCQ
QLGHPILGCD LYGGLLLPGT ERTPRLMLHA SELHFVHPIS QEPIKAHHAS PF
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