Gene Spro_3906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3906 
Symbol 
ID5604667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4325729 
End bp4326463 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content55% 
IMG OID640939466 
ProductGntR family transcriptional regulator 
Protein accessionYP_001480129 
Protein GI157372140 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.756884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATGTT TTTGTGTACT ATGTCTAAAA ACTTTCTTCT TGCAGGAGCA GAACGTGATG 
AGCCTTGACG CAGAGAGCCA GGAACTCCCG ACGGCAGAGG AAGCCGGAAT GTCACTGAAT
GAACTGGCCT ATCGGCGCTT TAAGCAGGCA TTGGTGACGT TGAGTTATAA GCCTGGTGAA
TATCTCAATA CCGCGCAGGT AATGAGTGAG CTGGATATGG GCAGAACGCC TATCAATCAG
GCAATCCACC GGCTGGCCAA TGAAGGGTTG TTACAGGTGA TCCCGCGTAA AGGAGTGATG
GTTTCGCCGC TGTCGATGGA TGACGCACTG GAACTGATTG AAGTTCGACT GGCCAATGAA
ATGCTGTGTA TGCGGCTGGC AAGCAAGCGA ATTACCGAAC CACAAGTCGC CGCACTGACG
GCCCTCAATC AACAAATTGA AGTCGCCAGC CAGCGCCGTG ACCGGGTGCA GATGATGACG
CTGGACCACC AGTTCCACCA GCAGCTGGCG CAGATCGCCG GGAATAATAT GCTGGCGGAC
ATCCTGAGCG TGCTGCATGC CAGGGCGCAA CGCTTTTGGG CCAGCACGCT GTCACGCGAA
GGTCATATGC GAGAGGTGAT CGAAGAACAT CGAGCCATTA TCGCTGCACT GGCCGCACAG
GATGACGACG CAGCCGCCAA TGCAGCAGAG GCGCACATTC TGTCTTTCCG CAGCGCGCTG
CTGCATGAGG GCTGA
 
Protein sequence
MPCFCVLCLK TFFLQEQNVM SLDAESQELP TAEEAGMSLN ELAYRRFKQA LVTLSYKPGE 
YLNTAQVMSE LDMGRTPINQ AIHRLANEGL LQVIPRKGVM VSPLSMDDAL ELIEVRLANE
MLCMRLASKR ITEPQVAALT ALNQQIEVAS QRRDRVQMMT LDHQFHQQLA QIAGNNMLAD
ILSVLHARAQ RFWASTLSRE GHMREVIEEH RAIIAALAAQ DDDAAANAAE AHILSFRSAL
LHEG