Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3820 |
Symbol | |
ID | 5606798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | - |
Start bp | 4227308 |
End bp | 4227817 |
Gene Length | 510 bp |
Protein Length | 169 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640939380 |
Product | hypothetical protein |
Protein accession | YP_001480044 |
Protein GI | 157372055 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.39833 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.266235 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACA AGATGATTTT CAATAATATT GATGGCCAGC GCGGGATGAC GCTGATTGAG CTGCTGGTGG TGATTACCCT GGCAGGCCTG CTGACCGGCT GGGGGGTTAG CCACTGGCGT CATTATCAAC AGGCCCTGCG GCTGGAACAT ACCGCGCAGC AACTGTTGGC ATTTCTCACC CGGTTACAGG CAGACGCCAA CTGGCGCAAC CGCACGGCAC TGCTGGGGTT TAAAACCGGC GATCCCTGGT GCATCGGCAG CGGCCAATCG CCAATGGATT GCGCAGCGCT CGGCGATGAT GTGTTCAGCC CCGGCTATCG GGACGTGCAA CTGGCGGGGT TTACTCAAAA GGATATGGGG TTCTATGGCC TGCGTAACAA TGCACAGGCC GGGCATATCT TGCTCAGCAA TGGCGCTGGC CGCCTGCGGT TGGTGCTGTC TGCCAAGGGG CGGCTACGGT TATGCAGTGA AGGCGCGAGC ATAAGAGGGA TTACGACATG CCAGCTCTAG
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Protein sequence | MNDKMIFNNI DGQRGMTLIE LLVVITLAGL LTGWGVSHWR HYQQALRLEH TAQQLLAFLT RLQADANWRN RTALLGFKTG DPWCIGSGQS PMDCAALGDD VFSPGYRDVQ LAGFTQKDMG FYGLRNNAQA GHILLSNGAG RLRLVLSAKG RLRLCSEGAS IRGITTCQL
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