Gene Spro_3820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3820 
Symbol 
ID5606798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4227308 
End bp4227817 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content58% 
IMG OID640939380 
Producthypothetical protein 
Protein accessionYP_001480044 
Protein GI157372055 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.39833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.266235 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACA AGATGATTTT CAATAATATT GATGGCCAGC GCGGGATGAC GCTGATTGAG 
CTGCTGGTGG TGATTACCCT GGCAGGCCTG CTGACCGGCT GGGGGGTTAG CCACTGGCGT
CATTATCAAC AGGCCCTGCG GCTGGAACAT ACCGCGCAGC AACTGTTGGC ATTTCTCACC
CGGTTACAGG CAGACGCCAA CTGGCGCAAC CGCACGGCAC TGCTGGGGTT TAAAACCGGC
GATCCCTGGT GCATCGGCAG CGGCCAATCG CCAATGGATT GCGCAGCGCT CGGCGATGAT
GTGTTCAGCC CCGGCTATCG GGACGTGCAA CTGGCGGGGT TTACTCAAAA GGATATGGGG
TTCTATGGCC TGCGTAACAA TGCACAGGCC GGGCATATCT TGCTCAGCAA TGGCGCTGGC
CGCCTGCGGT TGGTGCTGTC TGCCAAGGGG CGGCTACGGT TATGCAGTGA AGGCGCGAGC
ATAAGAGGGA TTACGACATG CCAGCTCTAG
 
Protein sequence
MNDKMIFNNI DGQRGMTLIE LLVVITLAGL LTGWGVSHWR HYQQALRLEH TAQQLLAFLT 
RLQADANWRN RTALLGFKTG DPWCIGSGQS PMDCAALGDD VFSPGYRDVQ LAGFTQKDMG
FYGLRNNAQA GHILLSNGAG RLRLVLSAKG RLRLCSEGAS IRGITTCQL