Gene Spro_3785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3785 
Symbol 
ID5607296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4185038 
End bp4185796 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content52% 
IMG OID640939342 
Productundecaprenyl diphosphate synthase 
Protein accessionYP_001480009 
Protein GI157372020 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.218276 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00197218 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGTCCG CAAATCAACA AGAGGCTAAT CTGTCCACTC TGGGGCCACG ACATGTCGCC 
ATTATTATGG ACGGCAACGG GCGCTGGGCT AAACGTCAGG GTAAGTTACG TGTCTTCGGT
CATAAAGCAG GGGTGAAATC GGTGCGTCGC GCGGTCAGTT TTGCCGCCAA CAACCATTTA
GATGCGCTCA CGCTTTATGC CTTCAGCAGC GAGAACTGGA ATCGTCCAGT GCAGGAAGTT
TCCGCTTTGA TGGAGCTTTT CGTCCGCGCC TTGGACAGTG AAGTAAAAAG CCTGCATAAA
CATAACGTCA GACTGCGAGT GATCGGTGAT ATCAGCCGTT TCAGCACGCG CTTGCAGGAG
CGGATCCGTC GCTCCGAGCA ACTGACAGAA AATAACGATG GCCTGACGCT CAACATTGCT
GCCAACTATG GCGGCCGTTG GGATATTATT CAGGGAGTAA GGGAACTGGC TGAGCAGGTG
AAGGACGGTT CACTGCGTCC GGATCAAATC AGCGAAGAGT TACTGGGTGA GCGGATCTGC
ATGAACGATC TGTCGCCGGT GGATTTGGTG ATCCGTACCG GTGGCGAACA TCGCATCAGT
AACTTCTTGC TGTGGCAAAT TGCTTATGCC GAACTTTACT TTACTGATGT ACTCTGGCCT
GATTTTGATG AACTTGTCTT TGAAGGTGCG CTGAATGCAT TTGCACAACG CGAGCGTCGC
TTCGGGGGAA CAACACCTAT CGGCGCCAAT GCGTCCTAG
 
Protein sequence
MSSANQQEAN LSTLGPRHVA IIMDGNGRWA KRQGKLRVFG HKAGVKSVRR AVSFAANNHL 
DALTLYAFSS ENWNRPVQEV SALMELFVRA LDSEVKSLHK HNVRLRVIGD ISRFSTRLQE
RIRRSEQLTE NNDGLTLNIA ANYGGRWDII QGVRELAEQV KDGSLRPDQI SEELLGERIC
MNDLSPVDLV IRTGGEHRIS NFLLWQIAYA ELYFTDVLWP DFDELVFEGA LNAFAQRERR
FGGTTPIGAN AS