Gene Spro_3643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3643 
Symbol 
ID5606115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp4030320 
End bp4031126 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content60% 
IMG OID640939194 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001479867 
Protein GI157371878 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTCTG AGCGCGCACC ATTAGGGCTG AAACTGGCCG CCTGGGGCGG TCTGATCTTC 
CTGCATTTCC CGCTGGCGAT TATCGCCATC TATGCCTTCA ATACCGAGGA CGCGGCGTTC
AGCTTCCCGC CGAAGGGCTT TACGCTGCAT TGGTTTAGTG TCGCTGCCGG TCGGCAGGAC
ATTATCGATG CGATGCTGCT TTCCGCGCAG ATTGCTGCGC TGGCGACGGC GGTGGCGCTG
GTGCTGGGCA CCCTGGCGGC GGCGGCGCTG TACCGGCGTG ATTTCTTCGG TAAGGACAGC
ATTTCACTGT TGCTGCTGTT ACCTATCGCG CTGCCGGGCA TTGTTACCGG TCTGGCGCTG
CTGGCGGCGT TCAAGGCGCT GAATATCGAG CCGGGAGTAC TGACCATCGT GATCGGTCAT
GCCACCTTCT GCGTGGTGAT CGTATTCAAC AATGTCATCG CTCGTTTCCG CCGGACTTCC
CATAGCCTGA TCGAGGCTTC CATGGATCTC GGTGCCGACG GTTGGCAAAC CTTCCGCTAC
GTGATGCTGC CCAACCTGGG TTCAGCATTG CTGGCCGGTG GCATGCTGGC GTTCGCACTG
TCGTTTGATG AAATTATTGT CACCACCTTT ACCGCCGGGC ATGAGCGCAC GCTGCCGCTG
TGGCTGCTCA ATCAGCTCGG TCGTCCGCGC GATGTGCCGA TCACCAACGT GGTGGCGCTG
TCGGTGATGT TGCTGACCAT GATCCCGATT TTGGGGGCCT ATTACCTGAC CAAGGGCGGC
GAAAGCGTCG CCGGCAGCGG CAAATAA
 
Protein sequence
MHSERAPLGL KLAAWGGLIF LHFPLAIIAI YAFNTEDAAF SFPPKGFTLH WFSVAAGRQD 
IIDAMLLSAQ IAALATAVAL VLGTLAAAAL YRRDFFGKDS ISLLLLLPIA LPGIVTGLAL
LAAFKALNIE PGVLTIVIGH ATFCVVIVFN NVIARFRRTS HSLIEASMDL GADGWQTFRY
VMLPNLGSAL LAGGMLAFAL SFDEIIVTTF TAGHERTLPL WLLNQLGRPR DVPITNVVAL
SVMLLTMIPI LGAYYLTKGG ESVAGSGK