Gene Spro_3468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3468 
Symbol 
ID5604834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3839883 
End bp3840683 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content62% 
IMG OID640939021 
ProductTonB family protein 
Protein accessionYP_001479694 
Protein GI157371705 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGTC CGTCTTTATC TTATCCGCTC GCCTCCATGC CACAGCCGCG CTGGGCGCGC 
GGATTTTTAT GTGCGATAGC GGCACATGTG GCGCTGGTAC TGCTGTTTTA TTGGCCACCC
CAGCCGCTGC CGCCAATGCA GTTAGCGCCA CCGGCGGTGA TGATGAGTTG GGCGGCACAG
ATTGAAGCAC CGGAAACCCC CAAGCCGCTG CCGTTGGGTG TGCAACAGGC CGAGTCTGCA
GCGGCACAAC CGGCCGAGCC GCAGGATCAA CCCGATTTGC CCAAGTTGGC GCGGGCCGAA
AAGACCAAAA TCAGCGTGGC TGAGAAAAAG CGAACCGAAC ACCAGCCACC GCAGAAAGCC
CAGCCGAAGC CGGAACAGCA GGTGAAAGAG ATCAGGCACG CCGCTGCATC CAGCGCTGCC
GCACCGAAAG CCTTGAACAT AGCCCGGCAG ACGGCCGCAC CGCTGAACAG CGATTCCGCA
AGCAGCGAAC AGGTCAGGCT GTCGTGGGAA AGCCGGGTAA AGGGAATGCT AAACCGCATC
AAGCGTTATC CGCCGGATGC GCAGCGCCGC CGCCGTACCG GTATGCCACA GGTGTCTTTT
TCTGTGGATG CTCAGGGACG GGTTTTCGAT CTGACCTTGC ATGCTCCGTC GGGCACCGCC
TCGCTGGATC GTGAGGCGCT GGCCGTGGTC ATGCGGGCGC AGCCACTGCC GCCACCACCG
GTCGAAATGC TGCGGCAGGG CAACGTTCAG GTAACGATGC CCATAGATTT TAATCTGGCG
GCGCTGGACG CCAGCCAATA A
 
Protein sequence
MPSPSLSYPL ASMPQPRWAR GFLCAIAAHV ALVLLFYWPP QPLPPMQLAP PAVMMSWAAQ 
IEAPETPKPL PLGVQQAESA AAQPAEPQDQ PDLPKLARAE KTKISVAEKK RTEHQPPQKA
QPKPEQQVKE IRHAAASSAA APKALNIARQ TAAPLNSDSA SSEQVRLSWE SRVKGMLNRI
KRYPPDAQRR RRTGMPQVSF SVDAQGRVFD LTLHAPSGTA SLDREALAVV MRAQPLPPPP
VEMLRQGNVQ VTMPIDFNLA ALDASQ