Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_3398 |
Symbol | |
ID | 5603716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 3756696 |
End bp | 3757847 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640938945 |
Product | putative outer membrane protein |
Protein accession | YP_001479624 |
Protein GI | 157371635 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.26411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATACA AATTGCGCGC ATTAACCCAG GCAATTGCTC TGGGATTGGT AGTTGGCAGT GCTTCTTTCG CCGCCCAGGC TGAAATTACC CTGCTAAAGC AGGATCCACA GGCGGGCGAT CCGCTGAGCC GTCTTAATTT TACCGTCGGC GGCAGCATCC GTCCGCAGTT CAACAATATG ACCGGCGATG GTGATAAAGG CTCTTACAAA CGTAACGGTT TTGACGGCGG AACCCGCTTC CGCTTCACCG CCGATTACTA CCTGTTCGAC GACATTAGCT GGATCAGCTA CTACGAGCTG GGGGTGAATA TCCCCGCGCT GTTCAACTGG GATAACCACT ATGCAGAGGG CGCCAACAAC ACCAGCCGCC GCATGTTGTA CACCGGTTTG AAAAGCAAAA CCTGGGGACA ATTGACCTTT GGTCAACAAA ACAGCGTGTA CTACGACGTG GTTGGCGCCA AAACCGATAT CTGGGATTAC GACATGCTGG CCCAGGCTCC GGGGAACGGC ATCAACGGGG ATTACGACGG ATCTTACCGT TCACGTAAAA TGCTGAAGTA CAAAAATACC TTCGGCGATG CGGATGTGTA TGCCTCCTAC CTGTTCAGCG ATAACGAGTA TCTGCCGGGG AATGGCCTGC GCTACAAGCG CGAGGGAGGC GGTTCATTGG GTGTGGATTA CCACCTGACG CCGGACCTGA CCTGGGGTAC CGCGTGGAAC TATACCCGCG CCGAGATGCG TGACCCTGCC ACCCACGCTA CGAAAGATTA TGACCAGAAC ATCCTGGGTA CCGCGCTGAG CTGGAAACCG GATAACTGGA CGCTGACCTT TGGCGGCGGC TGGTACAACA ACTTCCTGAC CACCAAAAAA GCCGACGTTA ACGACTACTT TGCCGGTGAC GCCTGGGGTA TTGAATATCT GGCCGGTTAC ACCGTGCCGG TAGGGCAATA TGCGGTGAAA TCCGTGATGC CGTACTTTAT GGGCGACCGT TTGCAGTACG TCAGTGGCCG TGACTATCAG CGTATTGATA ACGGCCTGGG CGTGACCGTG CAGTTTGATT ACGGTTTCCG CGTCGATGTG GAACACGTGC TGACGTCAAG CACCGACAAC CTGGGCGATA TGACGCTGGT GCGTCTGCGT TACGATTTCT AA
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Protein sequence | MTYKLRALTQ AIALGLVVGS ASFAAQAEIT LLKQDPQAGD PLSRLNFTVG GSIRPQFNNM TGDGDKGSYK RNGFDGGTRF RFTADYYLFD DISWISYYEL GVNIPALFNW DNHYAEGANN TSRRMLYTGL KSKTWGQLTF GQQNSVYYDV VGAKTDIWDY DMLAQAPGNG INGDYDGSYR SRKMLKYKNT FGDADVYASY LFSDNEYLPG NGLRYKREGG GSLGVDYHLT PDLTWGTAWN YTRAEMRDPA THATKDYDQN ILGTALSWKP DNWTLTFGGG WYNNFLTTKK ADVNDYFAGD AWGIEYLAGY TVPVGQYAVK SVMPYFMGDR LQYVSGRDYQ RIDNGLGVTV QFDYGFRVDV EHVLTSSTDN LGDMTLVRLR YDF
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