Gene Spro_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3398 
Symbol 
ID5603716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3756696 
End bp3757847 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content55% 
IMG OID640938945 
Productputative outer membrane protein 
Protein accessionYP_001479624 
Protein GI157371635 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.26411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATACA AATTGCGCGC ATTAACCCAG GCAATTGCTC TGGGATTGGT AGTTGGCAGT 
GCTTCTTTCG CCGCCCAGGC TGAAATTACC CTGCTAAAGC AGGATCCACA GGCGGGCGAT
CCGCTGAGCC GTCTTAATTT TACCGTCGGC GGCAGCATCC GTCCGCAGTT CAACAATATG
ACCGGCGATG GTGATAAAGG CTCTTACAAA CGTAACGGTT TTGACGGCGG AACCCGCTTC
CGCTTCACCG CCGATTACTA CCTGTTCGAC GACATTAGCT GGATCAGCTA CTACGAGCTG
GGGGTGAATA TCCCCGCGCT GTTCAACTGG GATAACCACT ATGCAGAGGG CGCCAACAAC
ACCAGCCGCC GCATGTTGTA CACCGGTTTG AAAAGCAAAA CCTGGGGACA ATTGACCTTT
GGTCAACAAA ACAGCGTGTA CTACGACGTG GTTGGCGCCA AAACCGATAT CTGGGATTAC
GACATGCTGG CCCAGGCTCC GGGGAACGGC ATCAACGGGG ATTACGACGG ATCTTACCGT
TCACGTAAAA TGCTGAAGTA CAAAAATACC TTCGGCGATG CGGATGTGTA TGCCTCCTAC
CTGTTCAGCG ATAACGAGTA TCTGCCGGGG AATGGCCTGC GCTACAAGCG CGAGGGAGGC
GGTTCATTGG GTGTGGATTA CCACCTGACG CCGGACCTGA CCTGGGGTAC CGCGTGGAAC
TATACCCGCG CCGAGATGCG TGACCCTGCC ACCCACGCTA CGAAAGATTA TGACCAGAAC
ATCCTGGGTA CCGCGCTGAG CTGGAAACCG GATAACTGGA CGCTGACCTT TGGCGGCGGC
TGGTACAACA ACTTCCTGAC CACCAAAAAA GCCGACGTTA ACGACTACTT TGCCGGTGAC
GCCTGGGGTA TTGAATATCT GGCCGGTTAC ACCGTGCCGG TAGGGCAATA TGCGGTGAAA
TCCGTGATGC CGTACTTTAT GGGCGACCGT TTGCAGTACG TCAGTGGCCG TGACTATCAG
CGTATTGATA ACGGCCTGGG CGTGACCGTG CAGTTTGATT ACGGTTTCCG CGTCGATGTG
GAACACGTGC TGACGTCAAG CACCGACAAC CTGGGCGATA TGACGCTGGT GCGTCTGCGT
TACGATTTCT AA
 
Protein sequence
MTYKLRALTQ AIALGLVVGS ASFAAQAEIT LLKQDPQAGD PLSRLNFTVG GSIRPQFNNM 
TGDGDKGSYK RNGFDGGTRF RFTADYYLFD DISWISYYEL GVNIPALFNW DNHYAEGANN
TSRRMLYTGL KSKTWGQLTF GQQNSVYYDV VGAKTDIWDY DMLAQAPGNG INGDYDGSYR
SRKMLKYKNT FGDADVYASY LFSDNEYLPG NGLRYKREGG GSLGVDYHLT PDLTWGTAWN
YTRAEMRDPA THATKDYDQN ILGTALSWKP DNWTLTFGGG WYNNFLTTKK ADVNDYFAGD
AWGIEYLAGY TVPVGQYAVK SVMPYFMGDR LQYVSGRDYQ RIDNGLGVTV QFDYGFRVDV
EHVLTSSTDN LGDMTLVRLR YDF