Gene Spro_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3296 
Symbol 
ID5607324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3648411 
End bp3649868 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content58% 
IMG OID640938842 
ProductNADH dehydrogenase subunit N 
Protein accessionYP_001479522 
Protein GI157371533 
COG category[C] Energy production and conversion 
COG ID[COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) 
TIGRFAM ID[TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.175095 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATAA CTCCTCAACA ACTGATCGCA TTGCTACCAC TGTTGATCGT CGGATTGACG 
GTGGTGGTTG TGATGCTAGG CATTGCGTGG CGACGCGACC ACTTTATCAA CGCCACCCTG
ACCGTGATCG GTCTAAACCT GGCGCTGCTT TCGCTGTACT TTGTCGGCCA GGCAGGCCCA
ATGGACGTCA CCCCGCTGCT GCGGGTTGAC GGCTACTCGA TGTTCTATAC CGGGCTGGTG
ATTCTGGCGA GTCTGGCGAC CTGTACCTTT GCCTATCCTT GGCTGGTCGG TTACCCGGAC
AACCGCGAAG AGTTCTACCT GCTGGTGCTG ATTGCTACCC TGGGTGGCAT TCTGCTGGCG
AGTGCCAACC ATCTGGCGTC GCTGTTCCTC GGTATTGAAC TGATCTCGCT GCCGCTGTTC
GGTCTGGTGG GTTATGCCTA CCGCCAGAAG CGTCCGCTGG AAGCGGCCAT CAAGTACATG
TTGCTGTCCG CTGCCGCGTC GTCATTCCTG CTGTTTGGTA TGGCGCTGCT GTATGCCGAG
TCCGGCGACC TGTCACTGGC TGGCCTGGGC AAAAGCCTGC AAGAAAACAT GATGCACCAG
CCGCTGGTCC TGGCGGGTAT GGGCATGATG ATTGTCGGTC TGGGCTTCAA GCTGTCGCTG
GTGCCGTTCC AACTGTGGAC GCCGGATGTG TATCAGGGTG CGCCTGCGCC GGTTTCAACC
TTCCTGGCGA CCGCCAGCAA GATTGCAATC TTCGCCGTAG TGATGCGTTT GTTCCTGTAT
GCACCGGCCG CCGACAACGA AGCGCTGCGC ATGGTGCTGT CAATCATTGC CGTCTGCTCA
ATTTTGTTCG GCAACCTGAT GGCTATCAGC CAGACCAATA TCAAGCGTCT GCTGGGTTAC
TCGTCGATCG CCCACCTGGG TTATCTGCTG GTGGCGTTGA TTGCGGTGCA AACCCATCAG
CTGTCGTTGG AAACCGCCGG GGTTTACCTG GCCGGTTACC TGTTCAGCAG CCTGGGCGCG
TTTGGCGTCG TCAGCCTGAT GTCCAGCCCG TACCGTGGCC CGGATGCCGA TTCACTGTTC
TCCTACCGTG GTCTGTTCTG GCATAAGCCA ATTCTGTCTG CGGTAATGAC GGTGATGATG
CTGTCACTGG CCGGTATCCC GATGACTCTG GGCTTTATCG GTAAGTTCTT CGTTATCGCG
ATGGGCGTCA GTGCTCACCT GTGGTGGTTG ACCGGCGCAG TGGTGCTGGG TAGTGCCATC
GGTTTGTACT ACTACCTGCG TGTAACCGTC AGCCTGTTCC TCAGCGCGCC GGAAGCGCTG
CAGCGCGATA CCCCGAACAA CTGGGCGTTG ACCGCAGGCG GTGTGGTGGT GTTGATCTCC
GCCGCGTTGG TGTTGCTGCT GGGGGTTTAT CCGCAGCCGC TGATTACGCT GGTGCAGATG
GCACAGCCGA TGTTCTGA
 
Protein sequence
MTITPQQLIA LLPLLIVGLT VVVVMLGIAW RRDHFINATL TVIGLNLALL SLYFVGQAGP 
MDVTPLLRVD GYSMFYTGLV ILASLATCTF AYPWLVGYPD NREEFYLLVL IATLGGILLA
SANHLASLFL GIELISLPLF GLVGYAYRQK RPLEAAIKYM LLSAAASSFL LFGMALLYAE
SGDLSLAGLG KSLQENMMHQ PLVLAGMGMM IVGLGFKLSL VPFQLWTPDV YQGAPAPVST
FLATASKIAI FAVVMRLFLY APAADNEALR MVLSIIAVCS ILFGNLMAIS QTNIKRLLGY
SSIAHLGYLL VALIAVQTHQ LSLETAGVYL AGYLFSSLGA FGVVSLMSSP YRGPDADSLF
SYRGLFWHKP ILSAVMTVMM LSLAGIPMTL GFIGKFFVIA MGVSAHLWWL TGAVVLGSAI
GLYYYLRVTV SLFLSAPEAL QRDTPNNWAL TAGGVVVLIS AALVLLLGVY PQPLITLVQM
AQPMF