| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_3222 |
|---|
| Symbol | |
|---|
| ID | 5606260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Serratia proteamaculans 568 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009832 |
|---|
| Strand | - |
|---|
| Start bp | 3550908 |
|---|
| End bp | 3551990 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640938765 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_001479448 |
|---|
| Protein GI | 157371459 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000118278 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAT CCACCGATCC TCTGTCTGAC GCCAAGGGGC AACCCGACGT CAACGTTATG
GGGCGTTATC ACCATATTCT CCGCCACCGT TTATTGATGA TGGGGGTGTT GGCATTGGCA
ATTTTGGGTT CGCTGCTGCT GGATTTTACC CTGGGGCCAT CCGGACTTTC GCTGTCCTCT
CTGTGGCAAA CGCTGATTGA TCCTGCGGCT GCAGATGCCG GTACGCGGGT GATTGTCTGG
GATATCCGTT TGCCTTATGC CTTGATGGCC GTGGTGGTGG GGTTTGCGCT TGGCCTGGCC
GGGGCAGAAA TGCAAACCAT CCTGAATAAC CCGCTTGCCA GCCCCTTTAC CCTCGGGGTT
TCTTCTGCCG CCGCTTTCGG CGCGGCACTG GCCATTGTGC TGGGGATTGG CGTGCCGGGC
ATTCCTGACC AGTGGTTTAT TTCCGCCAAT GCGTTTATTT TCGCCTTGTT TGCCGCATTG
ATGCTGGACG GCATTACACG CTGGACGAGG GTTGCCACCT CCGGGGTGGT GCTGTTCGGG
ATTGCGCTGG TGTTCACCTT TAACGCGCTG GTCTCCATGA TGCAGTTTAT TGCCAGCGAA
GATACGCTGC AGGGGCTGGT GTTCTGGACG ATGGGTAGTC TGGCCCGCGC CTCCTGGGAC
AAACTGGGCA TCCTGCTCGG CGTATTTGCC GTGCTGCTGC CGTTGTCGAT GATGAGCTCG
TGGAAGTTGA CCGCGTTGCG TCTGGGTGAG GATCGGGCGG TGAGCTTCGG TATCGATGTG
CGCCGCCTGC GCCTGACCAC CTTGCTGCGT ATCAGTATTC TTTCCGCATT GGCGGTGGCA
TTTGTTGGCC CGATTGGTTT TATCGGCCTG GTAGCGCCAC ATATCGCCCG CATGATTTTC
GGTGAAGATC ATCGTTTCTA TCTGCCGGCC AGTGCGTTGA TTGGCGCACT GGTGCTGTCG
ATGGCCTCAG TGGCCTCGAA AAACCTGATC CCGGGGATCA TCATTCCGGT CGGCATCGTC
ACCTCGCTGG TGGGTGTGCC GTTCTTCCTG AGTATTATTC TGCGTCATCG GGGGAATGTA
TGA
|
|---|
| Protein sequence | MSVSTDPLSD AKGQPDVNVM GRYHHILRHR LLMMGVLALA ILGSLLLDFT LGPSGLSLSS
LWQTLIDPAA ADAGTRVIVW DIRLPYALMA VVVGFALGLA GAEMQTILNN PLASPFTLGV
SSAAAFGAAL AIVLGIGVPG IPDQWFISAN AFIFALFAAL MLDGITRWTR VATSGVVLFG
IALVFTFNAL VSMMQFIASE DTLQGLVFWT MGSLARASWD KLGILLGVFA VLLPLSMMSS
WKLTALRLGE DRAVSFGIDV RRLRLTTLLR ISILSALAVA FVGPIGFIGL VAPHIARMIF
GEDHRFYLPA SALIGALVLS MASVASKNLI PGIIIPVGIV TSLVGVPFFL SIILRHRGNV
|
|---|
| |