Gene Spro_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3171 
Symbol 
ID5605500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3489024 
End bp3490097 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content55% 
IMG OID640938714 
Productcitrate lyase ligase 
Protein accessionYP_001479399 
Protein GI157371410 
COG category[C] Energy production and conversion 
COG ID[COG3053] Citrate lyase synthetase 
TIGRFAM ID[TIGR00124] [citrate (pro-3S)-lyase] ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.16085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGGCG ATGCCATATT TGACCGAGTG AAAAGATCAG ATCATAAAAA TATTACGCAG 
ATTAATGCCT TCCTGCGGAG TAACGATCTG AATATTGATA CGACGGTTGA AATATTTATT
ACCGTTACGC AAAACGATAA GTTGGTCGCC TGCGGCGGCA TAGCAGACAA TATTATCAAG
TGCGTCGCTA TCAGCCCACA AATGCGTGGC GAAGGCTTGG CACTGCGGCT GGCGACCGAA
CTGGTGAATC TGGCGTATGA ACGCCACCAC ACCCAGCTAT TTATCTATAC CAAAATCCAA
AATGAACCGC TGTTCCGCCA GTGTGGTTTT TATCCGATAG CCCAGGTACC GGGCATCGTG
GTGCTGATGG AAAACAGCCC GTGTCGCCTG AAGCGCTATG CCGCCCAACT GGCGGGTCAG
CGGCAGCCGG GCAAGCGCAT TGGCAGCATT GTGATGAATG CCAACCCCTT TACCCGTGGT
CACCAATATC TGGTGCGCCA GGCGGCCGAA AAGTGCGACT GGCTGCACCT GTTTTTGGTC
AAGGAAAACA CCTCGCGCTT CAGCTATGAA GACCGGCGGC GACTGGTGCT GGCAGGCACG
GCAGACATTG CCAACCTGAC AGTGCATGAA GGCTCGCAAT ACGTCATTTC CCGCGCCACT
TTCCCTTGTT ACTTCATTAA AGATCAGGGC ATTGCCGACG ACTGCTACAC CGAGATCGAT
CTGAAGATCT TTCGTCAGTA TCTGGCACCC GCGCTGGGTA TCACCCACCG TTTTGTCGGC
AATGAGCCGT TCTGCGCGGT CACCGCGAAG TACAACCGCG ATATGCGTTA TTGGCTGGAA
ACCCCGGCGT TATCCAGCCC GCCAATCGCG CTGGTAGAAA TTGAGCGTTT GCAATATCAG
GGCACGGCAA TCTCCGCCTC CTGGGTGCGC AAACTGTTGG CCGCGGGTGA TTTTCACGCC
GCCGCGCCGC TGGTGCCACC GGACACCCTG TATTACCTGC AAGATTTGCA AACGCAGCGC
CGGGCCAAAC CGGCGGCCAC CCCCTTTGAA TCCGCACAAT CAGGTGAAAG ATGA
 
Protein sequence
MLGDAIFDRV KRSDHKNITQ INAFLRSNDL NIDTTVEIFI TVTQNDKLVA CGGIADNIIK 
CVAISPQMRG EGLALRLATE LVNLAYERHH TQLFIYTKIQ NEPLFRQCGF YPIAQVPGIV
VLMENSPCRL KRYAAQLAGQ RQPGKRIGSI VMNANPFTRG HQYLVRQAAE KCDWLHLFLV
KENTSRFSYE DRRRLVLAGT ADIANLTVHE GSQYVISRAT FPCYFIKDQG IADDCYTEID
LKIFRQYLAP ALGITHRFVG NEPFCAVTAK YNRDMRYWLE TPALSSPPIA LVEIERLQYQ
GTAISASWVR KLLAAGDFHA AAPLVPPDTL YYLQDLQTQR RAKPAATPFE SAQSGER