Gene Spro_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3159 
Symbol 
ID5605269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3477884 
End bp3478513 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content59% 
IMG OID640938702 
Productthreonyl/alanyl tRNA synthetase SAD 
Protein accessionYP_001479387 
Protein GI157371398 
COG category[R] General function prediction only 
COG ID[COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.707092 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC GGCTTTATTA TTATAGCGAT GACTTACAGG GCGAAGCACA GGTGCTGGCC 
TGTACTCCGG TTGAAGACGG CGGATACGCG ATTGAGCTGA ACGCCACGCT GTTCCACCCG
CAGGGCGGCG GACAACCGGC CGACGGCGGC CTGCTCGGTA CTACCCCGGT GCTGCGTGTG
GCACAACAGG GCGAAAAAGT GCTGCATTTT ACCGCCGAAC CGCTGCCCGA AGGGCCGGTG
AGCGTAACGG TTGATGGCGA ACTGCGCCGC TTGCATACCC GTTGGCATTC CGCCGGACAT
CTGATTGGCT GGTTGGGTGA AACGCGCGGC TGGCGGCCGG TCAAGGCGCA CCACTGGCCG
GGTGAAGGAC GTATTACCTT CGTGCCGGAC GCAGAACCTC AAACCCTGGA TCAGGATTTC
CTGCATGCGG AGTTGGCGCG GCTGATTGCG GCGGATTTCC CACGCAAACA ACTGACGGTT
GACGGCCTGC GTCAGGTAGG TTTTGGTGAA TTGCCTACAT ATGGTTGCGG CGGTACCCAT
GTCCCTTCCC TGGCTGAACT GGGTAGGATA AATATTACCG CGCTCAAGAT GAAAAAAGGG
CAGTTGATCG TGCAGTATGA GCTGGGCTGA
 
Protein sequence
MTERLYYYSD DLQGEAQVLA CTPVEDGGYA IELNATLFHP QGGGQPADGG LLGTTPVLRV 
AQQGEKVLHF TAEPLPEGPV SVTVDGELRR LHTRWHSAGH LIGWLGETRG WRPVKAHHWP
GEGRITFVPD AEPQTLDQDF LHAELARLIA ADFPRKQLTV DGLRQVGFGE LPTYGCGGTH
VPSLAELGRI NITALKMKKG QLIVQYELG