Gene Spro_3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_3030 
Symbol 
ID5604087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp3333457 
End bp3334683 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content53% 
IMG OID640938571 
Productmajor facilitator transporter 
Protein accessionYP_001479259 
Protein GI157371270 
COG category[R] General function prediction only 
COG ID[COG2270] Permeases of the major facilitator superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.54277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAA ATGCCGTTGA GTCTAAATTC AGTTTTGGCT CCTATACCCG ATTACTGTCC 
GGCCCCGGAC ATGCCGCGCT TTCGTTGTTT GGTTTATTGC TGCGCTTTCC CGTGGCGATG
CGATCTATTA GCTGCATTAT GCTGCTTTCT GCCACGACCA ATTCGCTGTG GATAGCAGGC
ACCGTCGCCG GAACCTTAAT GATTACCCAG GCTTTGGCCA GCCCGATACT GGGGGGCTTT
GCTGACCGAT TCAGCCAGCG AAAAGTGCTT ATTGTCACCA GTTGCTGTCA CGTTATCGCC
ATAGCTTTGC TGATTGCCCT GGTGTTTCTT GATGCCCATT TATGGCTAAT TATGGCCGCG
GCTATTGGTA TTGGTTGTTC ATCAGTACCG GTTGATGGCT TTATTCGTAC CCGTTGGGCG
GCGATGGTCA CCGATGAGGC TCTGCGAACC GCCTATGCTT TAGAAACCGT ACTCGACGAG
ATTATTTTCT TGTTGGGGCC ATTGGTTGCC ATTGTGTTAG CTACGGTATT GCACCCCGCT
GCGGGGTTGG CTTTATGTGC CGTATTCACC TTCAGTGGGT CGATGGCGTT GGTGCTGCAT
CGGCGTTCAG AGCCGGTTAT TGTGCAGAAG GTTGACGAAA AAAACCGCAG GGCTATTAGC
ATGATATGGG TGCGTAGCCT GATGGTTTCT TATGCGGCGG TGGGCATATT CCTTGGCTCG
ATCGATGTCA TGATGATCGC CTTTGCCAAA GAGGTGGGCA ATCCCACTCT CGCCGGAGTG
CTGTTGTCTA TTTGCGCCGG GGGCAGCCTG GTCGGGGGGC TCTGCTATGG TGCGATGAAC
TGGTCTATCC CGCAGCCACG GCTGCTGTTG CTCACATCCG CCACGCTTTT CGCAGGCACC
GTTCCCCTGG TTTTCACCAG TTCCCCGTTG GTTATGGGTT TGTCTGCGTT TATCGCCGGT
TTATCGGTGG CGCCGTTATT AATTACCTGC AGTAACCTGC TGGAGTCATT AACCCCGAAA
GGCTGTTTAT CCGAAGGCTT TTCCTGGCTT TCAAGCGCCG GGTGGCTGGG TTTTTCCTTC
GGTGTCTCGG TGGGCGGGCA ACTTTCAGAT CAAACAGGGG CTGCCCAGGT CGCCTGGATC
GCTCTGGCCG CCGGTATGCT CGCCTTATTA GCCAGTCTGT TCAGCCAATC ACTACTCAGT
AAGAAATCAA TGCCAAGCCC CATTTAA
 
Protein sequence
METNAVESKF SFGSYTRLLS GPGHAALSLF GLLLRFPVAM RSISCIMLLS ATTNSLWIAG 
TVAGTLMITQ ALASPILGGF ADRFSQRKVL IVTSCCHVIA IALLIALVFL DAHLWLIMAA
AIGIGCSSVP VDGFIRTRWA AMVTDEALRT AYALETVLDE IIFLLGPLVA IVLATVLHPA
AGLALCAVFT FSGSMALVLH RRSEPVIVQK VDEKNRRAIS MIWVRSLMVS YAAVGIFLGS
IDVMMIAFAK EVGNPTLAGV LLSICAGGSL VGGLCYGAMN WSIPQPRLLL LTSATLFAGT
VPLVFTSSPL VMGLSAFIAG LSVAPLLITC SNLLESLTPK GCLSEGFSWL SSAGWLGFSF
GVSVGGQLSD QTGAAQVAWI ALAAGMLALL ASLFSQSLLS KKSMPSPI